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PLM1_60_b1_redo_sep16_scaffold_6294_7

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(6364..6912)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 182.0
  • Bit_score: 317
  • Evalue 1.20e-83
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 176.0
  • Bit_score: 296
  • Evalue 4.40e-78
peptide deformylase Tax=Micromonospora sp. CNB394 RepID=UPI000373E356 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 176.0
  • Bit_score: 297
  • Evalue 7.00e-78

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
GTGGCCGTGAAGCCGATCCGCCTCTTCGGCGATCCGGTGCTGCGCACGCCCGCTGAGCCCGTCGTCGACTTCGACAAGGAGCTCCGCAAGCTCGTCGGCGACCTCACCGAGACGATGCTCGACGAGGGCGGCGCCGGCCTGGCCGCACCGCAGCTCGGGGTGGGGCTGCGCGTCTTCGCCTACGACGTCGACGATGTCGTCGGGCACCTGATCAACCCGGTGCTGGAGTTCCCGGACGCGGAGGAGCAGGACGGCCCCGAGGGCTGCCTGTCCATCCCCGGCCTCTACTTTGACACGAAGCGCCGGATGAACGTGGTCGCCAAGGGCCAGGACCTGTACGGCGAGCCGGTCCAGCTGGTCGGCACCGCGCTGATGGCGCGCTGCGTCCAGCACGAGACCGACCATCTCGACGGGATCCTCTTCGTCGACCGGCTCGATCCGGAGACGAAGAAGGAAGCCATGAAGGCGATCCGGGAGGCGGAGTGGAACAACCAGCCGGCGCCGCAAATCAAGGTGAGCCCGCACCCACTGTTCGGGAAGACGCGCTGA
PROTEIN sequence
Length: 183
VAVKPIRLFGDPVLRTPAEPVVDFDKELRKLVGDLTETMLDEGGAGLAAPQLGVGLRVFAYDVDDVVGHLINPVLEFPDAEEQDGPEGCLSIPGLYFDTKRRMNVVAKGQDLYGEPVQLVGTALMARCVQHETDHLDGILFVDRLDPETKKEAMKAIREAEWNNQPAPQIKVSPHPLFGKTR*