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PLM1_60_b1_redo_sep16_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_5_1
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(179..400)
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=G8X404_STREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW97999.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_60_b1_redo_sep16_scaffold_5_2
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(618..1544)
DNA (927bp) protein (309aa)
Uncharacterized protein Tax=Streptomyces sp. PAMC26508 RepID=M9U230_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGJ59583.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;"
PLM1_60_b1_redo_sep16_scaffold_5_3
unknown

Not on your lists

comp(1598..2002)
DNA (405bp) protein (135aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5_4
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2035..3531)
DNA (1497bp) protein (499aa)
hypothetical protein Tax=Gordonia polyisoprenivorans RepID=UPI0002D491A0
Putative amino acid transporter {ECO:0000313|EMBL:GAB21949.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans NBRC 16320 = JCM 10675.;"
amino acid transporter
PLM1_60_b1_redo_sep16_scaffold_5_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4197..4727)
DNA (531bp) protein (177aa)
Putative uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IP55_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC80585.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM1_60_b1_redo_sep16_scaffold_5_6
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4952..6484)
DNA (1533bp) protein (511aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037141C2
amino acid permease-associated protein
Amino acid permease-associated region {ECO:0000313|EMBL:ADC58142.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
PLM1_60_b1_redo_sep16_scaffold_5_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6977..8122
DNA (1146bp) protein (382aa)
Agmatinase Tax=Frankia sp. CN3 RepID=G6HCU0_9ACTO
Agmatinase {ECO:0000313|EMBL:EWM13436.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
arginase/agmatinase family protein
PLM1_60_b1_redo_sep16_scaffold_5_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8135..9157
DNA (1023bp) protein (341aa)
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein Tax=Frankia sp. CN3 RepID=G6HCT9_9ACTO
sulfonate/nitrate/taurine ABC transporter periplasmic protein
Sulfonate/nitrate/taurine ABC transporter periplasmic protein {ECO:0000313|EMBL:AGZ45173.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_5_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9275..10174
DNA (900bp) protein (300aa)
Sulfonate/nitrate/taurine ABC transporter permease Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W835_9ACTO
sulfonate/nitrate/taurine ABC transporter permease
Sulfonate/nitrate/taurine ABC transporter permease {ECO:0000313|EMBL:AGZ45172.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_5_10
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10171..10968
DNA (798bp) protein (266aa)
Sulfonate/nitrate/taurine ABC transporter ATPase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IAP1_9PSEU
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDN23952.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
sulfonate/nitrate/taurine ABC transporter ATPase
PLM1_60_b1_redo_sep16_scaffold_5_11
unknown

Not on your lists

11490..11867
DNA (378bp) protein (126aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5_12
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11864..12817
DNA (954bp) protein (318aa)
cation diffusion facilitator family transporter Tax=Actinomadura flavalba RepID=UPI00037ECA9C
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KJY16077.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
cation diffusion facilitator family transporter
PLM1_60_b1_redo_sep16_scaffold_5_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13153..14148)
DNA (996bp) protein (332aa)
Negative regulator of beta-lactamase expression Tax=Cystobacter fuscus DSM 2262 RepID=S9P7P5_9DELT
lytic transglycosylase
Negative regulator of beta-lactamase expression {ECO:0000313|EMBL:EPX59131.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
PLM1_60_b1_redo_sep16_scaffold_5_14
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14336..15247
DNA (912bp) protein (304aa)
5'-3' exonuclease (EC:3.1.11.-)
5'-3' exonuclease {ECO:0000313|EMBL:AIJ16825.1}; EC=3.1.11.- {ECO:0000313|EMBL:AIJ16825.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
hypothetical protein Tax=Longispora albida RepID=UPI00035EBB3E
PLM1_60_b1_redo_sep16_scaffold_5_15
unknown

Not on your lists

15432..15875
DNA (444bp) protein (148aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15906..17147)
DNA (1242bp) protein (414aa)
ribonuclease D (EC:3.1.13.5)
Ribonuclease D {ECO:0000313|EMBL:ADB53805.1}; EC=3.1.13.5 {ECO:0000313|EMBL:ADB53805.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribonuclease D Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZG7_CONWI
PLM1_60_b1_redo_sep16_scaffold_5_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17161..18240)
DNA (1080bp) protein (360aa)
2-oxoacid ferredoxin oxidoreductase subunit beta Tax=Streptomyces scabrisporus RepID=UPI000371F8B2
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_5_18
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18237..20090)
DNA (1854bp) protein (618aa)
Putative oxidoreductase,alpha subunit {ECO:0000313|EMBL:CAJ59716.1}; EC=1.2.7.- {ECO:0000313|EMBL:CAJ59716.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Putative oxidoreductase,alpha subunit Tax=Frankia alni (strain ACN14a) RepID=Q0RRU9_FRAAA
oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_5_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20621..21730
DNA (1110bp) protein (370aa)
sulfite oxidase (EC:1.8.3.1)
Sulfite oxidase {ECO:0000313|EMBL:ADB51045.1}; EC=1.8.3.1 {ECO:0000313|EMBL:ADB51045.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Sulfite oxidase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8T1_CONWI
PLM1_60_b1_redo_sep16_scaffold_5_20
unknown

Not on your lists

comp(22155..23027)
DNA (873bp) protein (291aa)
limonene-1,2-epoxide hydrolase
PLM1_60_b1_redo_sep16_scaffold_5_21
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23101..23718)
DNA (618bp) protein (206aa)
cytochrome c oxidase, subunit III bin=GWC2_Chloroflexi_73_18 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
coxC; cytochrome C oxidase subunit III
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM1_60_b1_redo_sep16_scaffold_5_22
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23718..25394)
DNA (1677bp) protein (559aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase subunit I bin=GWC2_Chloroflexi_73_18 species=Rhodococcus qingshengii genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM1_60_b1_redo_sep16_scaffold_5_23
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(25432..26499)
DNA (1068bp) protein (356aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] bin=bin8_Chloro species=Isoptericola variabilis genus=Isoptericola taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
cytochrome c oxidase, subunit II
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM1_60_b1_redo_sep16_scaffold_5_24
Mycobacterium chelonae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26788..27801
DNA (1014bp) protein (338aa)
Putative uncharacterized protein Tax=Thermobifida fusca (strain YX) RepID=Q47N52_THEFY
Peptidylprolyl isomerase {ECO:0000313|EMBL:AKC40155.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chelonae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_5_25
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

27843..28886
DNA (1044bp) protein (348aa)
copper resistance transporter; K02351 putative membrane protein; K07245 putative copper resistance protein D bin=bin8_Chloro species=Kribbella catacumbae genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
putative copper resistance protein D
Tax=CSP1_4_Chloroflexi
PLM1_60_b1_redo_sep16_scaffold_5_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(29151..31172)
DNA (2022bp) protein (674aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3N1_THERP
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_5_27
unknown

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comp(31516..31857)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5_28
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31872..32591)
DNA (720bp) protein (240aa)
Putative uncharacterized protein Tax=Streptomyces griseoaurantiacus M045 RepID=F3NPQ8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KKD03902.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_5_29
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

32832..34148
DNA (1317bp) protein (439aa)
Quinolinate phosphoribosyl transferase bin=GWF2_Lentisphaerae_57_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
quinolinate phosphoribosyl transferase
Tax=GWF2_Lentisphaerae_57_35_curated
PLM1_60_b1_redo_sep16_scaffold_5_30
CSP1_5_NC10, NC10, Bacteria

Not on your lists

34213..35196
DNA (984bp) protein (328aa)
aldo/keto reductase bin=bin3_NC10 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Aldo/keto reductase
Tax=CSP1_5_NC10
Displaying items 1-30 of 117 in total

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