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PLM1_60_b1_redo_sep16_scaffold_78

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_78_31
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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33510..34226
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00035F88DD
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEB43387.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_78_32
unknown

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34454..34966
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_78_33
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35044..36282
-----------------
DNA (1239bp)
protein (413aa)
cystathionine gamma-synthase (EC:2.5.1.48)
cystathionine gamma-synthase Tax=Nonomuraea coxensis RepID=UPI000378228A
Putative Methionine gamma-lyase {ECO:0000313|EMBL:EPJ36127.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
PLM1_60_b1_redo_sep16_scaffold_78_34
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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36279..37451
-----------------
DNA (1173bp)
protein (391aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKA3_THEM7
PLM1_60_b1_redo_sep16_scaffold_78_35
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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37574..38482
-----------------
DNA (909bp)
protein (303aa)
Clp-family ATP-binding protease Tax=Streptomyces sp. Mg1 RepID=B4VEA0_9ACTO
NDP-hexose 4-ketoreductase {ECO:0000313|EMBL:KJY47844.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
Clp-family ATP-binding protease
PLM1_60_b1_redo_sep16_scaffold_78_36
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(38552..39769)
-----------------
DNA (1218bp)
protein (406aa)
aspartate aminotransferase Tax=Actinomadura atramentaria RepID=UPI0003636C94
Aspartate aminotransferase {ECO:0000313|EMBL:AKH86934.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
aspC1; aspartate aminotransferase
PLM1_60_b1_redo_sep16_scaffold_78_37
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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40000..41133
-----------------
DNA (1134bp)
protein (378aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
Phosphoserine aminotransferase Tax=Streptomyces sp. SPB74 RepID=B5GBB8_9ACTO
serC; putative phosphoserine aminotransferase
PLM1_60_b1_redo_sep16_scaffold_78_38
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(41223..41456)
-----------------
DNA (234bp)
protein (78aa)
AsnC family transcriptional regulator Tax=Frankia sp. BMG5.12 RepID=UPI0003712484
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFC79561.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
AsnC family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_78_39
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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41576..42400
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000366BC54
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:EYR64995.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
phosphoribosyltransferase
PLM1_60_b1_redo_sep16_scaffold_78_40
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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42467..44017
-----------------
DNA (1551bp)
protein (517aa)
Phosphoenolpyruvate carboxykinase Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC29_HELMI
pckA; phosphoenolpyruvate carboxykinase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_78_41
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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44224..45231
-----------------
DNA (1008bp)
protein (336aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
thiamine monophosphate kinase Tax=Frankia sp. BCU110501 RepID=UPI0003606F7F
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_b1_redo_sep16_scaffold_78_42
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

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comp(45427..46401)
-----------------
DNA (975bp)
protein (325aa)
hypothetical protein Tax=Arthrobacter sp. TB 23 RepID=UPI0002FCCB70
NAD(P)H quinone oxidoreductase
Tax=BJP_IG2069_Chloroflexi_70_12
PLM1_60_b1_redo_sep16_scaffold_78_43
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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46711..48147
-----------------
DNA (1437bp)
protein (479aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
6-phosphogluconate dehydrogenase, decarboxylating Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2G5_THEBD
6-phosphogluconate dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_78_44
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48273..48716
-----------------
DNA (444bp)
protein (148aa)
NAD-dependent aldehyde dehydrogenase Tax=Saccharomonospora glauca K62 RepID=I1D7W8_9PSEU
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
putative aldehyde dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_78_45
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(48697..50241)
-----------------
DNA (1545bp)
protein (515aa)
Resolvase domain protein Tax=Frankia sp. EUN1f RepID=D3CY13_9ACTO
Resolvase domain protein {ECO:0000313|EMBL:EFC84503.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
DNA recombinase
PLM1_60_b1_redo_sep16_scaffold_78_46
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(51005..52237)
-----------------
DNA (1233bp)
protein (411aa)
Transposase Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QNT7_9MYCO
Transposase
Transposase {ECO:0000313|EMBL:CCC45170.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
PLM1_60_b1_redo_sep16_scaffold_78_47
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

52724..54415
-----------------
DNA (1692bp)
protein (564aa)
Putative aldehyde dehydrogenase (NAD(P)+) {ECO:0000313|EMBL:EHN12044.1}; EC=1.2.1.5 {ECO:0000313|EMBL:EHN12044.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Putative aldehyde dehydrogenase (NAD(P)+) Tax=Patulibacter medicamentivorans RepID=H0E2N0_9ACTN
aldehyde dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_78_48
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(54517..55935)
-----------------
DNA (1419bp)
protein (473aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037E7667
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK53327.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_60_b1_redo_sep16_scaffold_78_49
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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56346..57197
-----------------
DNA (852bp)
protein (284aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI000374FCD7
Transposase {ECO:0000313|EMBL:KGI65841.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_78_50
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57519..58973
-----------------
DNA (1455bp)
protein (485aa)
hypothetical protein, partial Tax=Sciscionella marina RepID=UPI00036BEDF4
Uncharacterized protein {ECO:0000313|EMBL:KHD73931.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
transposase IS116/IS110/IS902 family protein
PLM1_60_b1_redo_sep16_scaffold_78_51
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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59517..60122
-----------------
DNA (606bp)
protein (202aa)
Trifolitoxin immunity protein Tax=Rhizobium meliloti RepID=UPI0003082C13
tfxG; trifolitoxin immunity protein
Putative trifolitoxin immunity protein {ECO:0000313|EMBL:AGG71488.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
PLM1_60_b1_redo_sep16_scaffold_78_52
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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60159..60323
-----------------
DNA (165bp)
protein (55aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00035E3EBC
Trifolitoxin immunity protein {ECO:0000313|EMBL:KKB78120.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
PLM1_60_b1_redo_sep16_scaffold_78_53
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(60475..61629)
-----------------
DNA (1155bp)
protein (385aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI000381A510
transposase IS116/IS110/IS902 family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_78_54
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61858..62748)
-----------------
DNA (891bp)
protein (297aa)
transposase IS401 Tax=Amycolatopsis balhimycina RepID=UPI00036149A8
Mobile element protein {ECO:0000313|EMBL:CEL17860.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
putative transposase
PLM1_60_b1_redo_sep16_scaffold_78_55
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(62745..63068)
-----------------
DNA (324bp)
protein (108aa)
transposase IS3 Tax=Kribbella catacumbae RepID=UPI00035E5B98
transposase
Transposase {ECO:0000313|EMBL:AEY85407.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM1_60_b1_redo_sep16_scaffold_78_56
unknown

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comp(63354..64289)
-----------------
DNA (936bp)
protein (312aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_78_57
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

64307..65002
-----------------
DNA (696bp)
protein (232aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
Uncharacterized protein {ECO:0000313|EMBL:KJY40409.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
RNA-directed DNA polymerase bin=GWC2_Chloroflexi_73_18 species=Mycobacterium vanbaalenii genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Displaying items 31-57 of 57 in total

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