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PLM1_60_b1_redo_sep16_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_128_1
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..511)
DNA (510bp) protein (170aa)
S-adenosylhomocysteine deaminase Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J4X6_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KIE50405.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
hydroxydechloroatrazine ethylaminohydrolase
PLM1_60_b1_redo_sep16_scaffold_128_2
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(744..2669)
DNA (1926bp) protein (642aa)
Xanthine permease Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK08_NAKMY
Xanthine permease {ECO:0000313|EMBL:EWT05450.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
xanthine permease
PLM1_60_b1_redo_sep16_scaffold_128_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2705..3547)
DNA (843bp) protein (281aa)
Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
Uricase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS73_RUBXD
urate oxidase
PLM1_60_b1_redo_sep16_scaffold_128_4
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3561..5879)
DNA (2319bp) protein (773aa)
carbon-monoxide dehydrogenase Tax=Amycolatopsis balhimycina RepID=UPI00035FFB37
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KIE50508.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
carbon-monoxide dehydrogenase large subunit
PLM1_60_b1_redo_sep16_scaffold_128_5

Not on your lists

comp(5866..6381)
DNA (516bp) protein (172aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI000373B931
Xanthine dehydrogenase iron-sulfur-binding subunit {ECO:0000313|EMBL:KGA11994.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_128_6
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6378..7217)
DNA (840bp) protein (280aa)
putative xanthine dehydrogenase FAD-binding subunit (EC:1.17.1.4)
Putative xanthine dehydrogenase FAD-binding subunit Tax=Ilumatobacter coccineus YM16-304 RepID=M5A361_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KIE51466.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
PLM1_60_b1_redo_sep16_scaffold_128_7
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7227..8126)
DNA (900bp) protein (300aa)
tartronate semialdehyde reductase Tax=Nocardiopsis prasina RepID=UPI00036F64DD
2-hydroxy-3-oxopropionate reductase
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ADH66002.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM1_60_b1_redo_sep16_scaffold_128_8
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8464..9720)
DNA (1257bp) protein (419aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y5A2_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG89297.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_128_9
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9915..10064
DNA (150bp) protein (50aa)
Nuclease (SNase domain-containing protein) Tax=Gloeocapsa sp. PCC 7428 RepID=K9XAW2_9CHRO
nuclease (SNase domain-containing protein)
Nuclease (SNase domain-containing protein) {ECO:0000313|EMBL:AFZ29800.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PLM1_60_b1_redo_sep16_scaffold_128_10
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10395..10997
DNA (603bp) protein (201aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003750EC6
resA; cytochrome c biogenesis protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
PLM1_60_b1_redo_sep16_scaffold_128_11
unknown

Not on your lists

11020..11313
DNA (294bp) protein (98aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_128_12
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11717..12235
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ35_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KJS63346.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_128_13
unknown

Not on your lists

12239..12466
DNA (228bp) protein (76aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_128_14
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12542..13060
DNA (519bp) protein (173aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI0003604D6C
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_128_15
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13050..13751
DNA (702bp) protein (234aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI000371FDDB
putative transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ABW00419.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_128_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13922..14356
DNA (435bp) protein (145aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000361EA27
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_60_b1_redo_sep16_scaffold_128_17
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14471..14842)
DNA (372bp) protein (124aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003684728
YCII family protein {ECO:0000313|EMBL:EWM09879.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_128_18
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15079..15237
DNA (159bp) protein (53aa)
Excinuclease ABC subunit A like protein Tax=Amycolatopsis azurea DSM 43854 RepID=M2PFK3_9PSEU
Excinuclease ABC subunit A like protein {ECO:0000313|EMBL:EMD23158.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_128_19
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15370..15741
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4N9J3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ34424.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_60_b1_redo_sep16_scaffold_128_20
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16113..17057
DNA (945bp) protein (315aa)
Alcohol dehydrogenase GroES domain protein Tax=Frankia sp. (strain EAN1pec) RepID=A8L1R1_FRASN
alcohol dehydrogenase
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABW13133.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_128_21
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17222..18106
DNA (885bp) protein (295aa)
UPI0003D06F30 related cluster Tax=unknown RepID=UPI0003D06F30
Uncharacterized protein {ECO:0000313|EMBL:ESZ03739.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ATP synthase subunit beta
PLM1_60_b1_redo_sep16_scaffold_128_22
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18242..18862
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Mycobacterium avium RepID=T2GPW3_MYCAV
Uncharacterized protein {ECO:0000313|EMBL:KBR67163.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium XTB13-223.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_128_23
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18864..19754
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Streptomyces sp. HGB0020 RepID=S2Y7Q9_9ACTO
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KIF70892.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
short-chain dehydrogenase/reductase SDR
PLM1_60_b1_redo_sep16_scaffold_128_24
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19800..20882
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI0003716514
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EWC59548.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_128_25
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20879..21697
DNA (819bp) protein (273aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI0003704906
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
ABC-2 type transporter
PLM1_60_b1_redo_sep16_scaffold_128_26
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21841..22521)
DNA (681bp) protein (227aa)
hypothetical protein Tax=Brevibacterium sp. JC43 RepID=UPI00037756EF
TetR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_21_curated
PLM1_60_b1_redo_sep16_scaffold_128_27
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22721..23014
DNA (294bp) protein (98aa)
single-stranded DNA-binding protein Tax=Streptomyces purpureus RepID=UPI0003729A2A
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_128_28
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23078..24970
DNA (1893bp) protein (631aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003706368
Cell division protein FtsK {ECO:0000313|EMBL:KHD74038.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
DNA translocase ftsK
PLM1_60_b1_redo_sep16_scaffold_128_29
unknown

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25110..25298
DNA (189bp) protein (63aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_128_30
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25384..26856
DNA (1473bp) protein (491aa)
Putative phage integrase Tax=Streptomyces scabies (strain 87.22) RepID=C9YVY9_STRSW
phage integrase
Putative phage integrase {ECO:0000313|EMBL:CBG69228.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
Displaying items 1-30 of 60 in total

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