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PLM1_60_b1_redo_sep16_scaffold_685

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_685_1
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(355..618)
DNA (264bp) protein (88aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EHX3_GEOS4
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACX68426.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
PLM1_60_b1_redo_sep16_scaffold_685_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

633..908
DNA (276bp) protein (92aa)
DeoR family transcriptional regulator Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AWP1_STRRD
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:ACZ87037.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_685_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1853..3160
DNA (1308bp) protein (436aa)
Putative M10A family peptidase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQ73_RUBGI
putative M10A family peptidase
Putative M10A family peptidase {ECO:0000313|EMBL:BAL95160.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
PLM1_60_b1_redo_sep16_scaffold_685_4
unknown

Not on your lists

3168..3482
DNA (315bp) protein (105aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_685_5
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

3678..4703
DNA (1026bp) protein (342aa)
LPPG:FO 2-phospho-L-lactate transferase Tax=uncultured Acidobacteria bacterium RepID=H5SDD1_9BACT
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:BAL54167.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
LPPG:FO 2-phospho-L-lactate transferase
PLM1_60_b1_redo_sep16_scaffold_685_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4791..6203
DNA (1413bp) protein (471aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKT5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23573.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_685_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6334..7863
DNA (1530bp) protein (510aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEA23571.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEA23571.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Long-chain-fatty-acid--CoA ligase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKT3_PSEUX
PLM1_60_b1_redo_sep16_scaffold_685_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7882..9096
DNA (1215bp) protein (405aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase {ECO:0000313|EMBL:AEA23570.1}; EC=2.3.1.176 {ECO:0000313|EMBL:AEA23570.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Propanoyl-CoA C-acyltransferase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKT2_PSEUX
PLM1_60_b1_redo_sep16_scaffold_685_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9149..9934
DNA (786bp) protein (262aa)
Nitroreductase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKT1_PSEUX
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEA23569.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_685_10
unknown

Not on your lists

9931..10284
DNA (354bp) protein (118aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_685_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10388..11467)
DNA (1080bp) protein (360aa)
Branched-chain amino acid binding protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKT7_PSEUX
branched-chain amino acid binding protein
Branched-chain amino acid binding protein {ECO:0000313|EMBL:AEA23575.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_685_12
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11547..11921)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037FF4CC
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
anti-anti-sigma factor
PLM1_60_b1_redo_sep16_scaffold_685_13
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11918..13552)
DNA (1635bp) protein (545aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000364F745
Membrane protein {ECO:0000313|EMBL:EWT02001.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
protein serine/threonine phosphatase
PLM1_60_b1_redo_sep16_scaffold_685_14
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13549..14442)
DNA (894bp) protein (298aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000364F745
Membrane protein {ECO:0000313|EMBL:EWT02001.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
protein serine/threonine phosphatase
PLM1_60_b1_redo_sep16_scaffold_685_15
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14840..15709
DNA (870bp) protein (290aa)
F420-dependent oxidoreductase family protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KUB5_9ACTO
F420-dependent oxidoreductase family protein {ECO:0000313|EMBL:EKX64386.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
luciferase family protein
PLM1_60_b1_redo_sep16_scaffold_685_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15928..16248)
DNA (321bp) protein (107aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000382787F
Uncharacterized protein {ECO:0000313|EMBL:ETK30573.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_685_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16623..17255
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S859_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73481.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_685_18
unknown

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17724..18032
DNA (309bp) protein (103aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_685_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18249..20591
DNA (2343bp) protein (781aa)
Peptidase S45 penicillin amidase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9Q8_CONWI
peptidase S45 penicillin amidase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_685_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20805..21350
DNA (546bp) protein (182aa)
multidrug MFS transporter Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628224
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:AGZ42248.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_685_21
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21334..21939
DNA (606bp) protein (202aa)
TetR family transcriptional regulator Tax=Paenibacillus elgii RepID=UPI000248CFC1
TetR family transcriptional regulator {ECO:0000313|EMBL:KEQ26998.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
TetR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_685_22
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22286..23086)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Amycolatopsis methanolica RepID=UPI00036C6FAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ25569.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_685_23
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23523..24059)
DNA (537bp) protein (179aa)
Wyosine base formation Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4TFL2_MYCGI
wyosine base formation
Wyosine base formation {ECO:0000313|EMBL:ABP47065.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens; (strain ATCC 700033 / PYR-GCK)).;"
PLM1_60_b1_redo_sep16_scaffold_685_24
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24028..24324)
DNA (297bp) protein (99aa)
Wyosine base formation Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4TFL2_MYCGI
wyosine base formation
Wyosine base formation {ECO:0000313|EMBL:ABP47065.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens; (strain ATCC 700033 / PYR-GCK)).;"
PLM1_60_b1_redo_sep16_scaffold_685_25
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25036..26244)
DNA (1209bp) protein (403aa)
Putative membrane protein Tax=Rhodococcus sp. JVH1 RepID=J1YYK3_9NOCA
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EJI93465.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
PLM1_60_b1_redo_sep16_scaffold_685_26
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

26289..26498
DNA (210bp) protein (70aa)
Transposase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXZ4_9CHLR
Transposase {ECO:0000313|EMBL:KIF35080.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_685_27
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26549..26899
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Octadecabacter arcticus 238 RepID=M9RTJ6_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI73826.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
PLM1_60_b1_redo_sep16_scaffold_685_28
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

26850..27176
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Octadecabacter arcticus 238 RepID=M9RTJ6_9RHOB bin=16ft_combo_ws3_JS1 species=Octadecabacter arcticus genus=Octadecabacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
transposase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM1_60_b1_redo_sep16_scaffold_685_29
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27275..27463
DNA (189bp) protein (63aa)
hypothetical protein, partial Tax=Nocardiopsis gilva RepID=UPI00037EC69E
Pirin {ECO:0000313|EMBL:KGN37015.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
Pirin domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_685_30
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27552..28157
DNA (606bp) protein (202aa)
Bifunctional deaminase-reductase domain protein Tax=Micromonospora RepID=D9T4C4_MICAI
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain-containing protein {ECO:0000313|EMBL:AHV97558.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
Displaying items 1-30 of 35 in total

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