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PLM1_60_b1_redo_sep16_scaffold_1045

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1045_1
unknown

Not on your lists

comp(3..179)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_2
unknown

Not on your lists

353..589
DNA (237bp) protein (79aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_3
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(490..1086)
DNA (597bp) protein (199aa)
hypothetical protein Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00036AE940
Transposase IS66 family protein {ECO:0000313|EMBL:KJE77319.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
putative IS66 family transposase
PLM1_60_b1_redo_sep16_scaffold_1045_4
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1197..2582
DNA (1386bp) protein (462aa)
TIR protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B0V4_FRADG
TIR protein
TIR protein {ECO:0000313|EMBL:AEH07717.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_1045_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3066..3512
DNA (447bp) protein (149aa)
Transposase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U867_9CHLR
Transposase {ECO:0000313|EMBL:CDH45749.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_1045_6
Aphanizomenon flos-aquae, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3575..4201
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Octadecabacter arcticus 238 RepID=M9RTJ6_9RHOB
Transposase {ECO:0000313|EMBL:KHG42960.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon flos-aquae 2012/KM1/D3.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1045_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4922..6658
DNA (1737bp) protein (579aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000375AA86
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EHK53773.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1045_8
unknown

Not on your lists

6731..7219
DNA (489bp) protein (163aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7022..7990)
DNA (969bp) protein (323aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GIZ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH53869.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
PLM1_60_b1_redo_sep16_scaffold_1045_10
unknown

Not on your lists

8223..8339
DNA (117bp) protein (39aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_11
unknown

Not on your lists

comp(8491..8781)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_12
unknown

Not on your lists

comp(9017..9835)
DNA (819bp) protein (273aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_13
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9926..10582)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS47_KRIFD
Uncharacterized protein {ECO:0000313|EMBL:GAM46116.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1045_14
unknown

Not on your lists

comp(10649..10960)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_15
unknown

Not on your lists

comp(11091..11285)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_16
unknown

Not on your lists

comp(11285..11422)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_17
unknown

Not on your lists

comp(11419..11577)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11655..12059)
DNA (405bp) protein (135aa)
Single-stranded DNA-binding protein Tax=Gordonia otitidis NBRC 100426 RepID=H5TS31_9ACTO
ssDNA-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_1045_19
unknown

Not on your lists

comp(12119..12256)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_20
unknown

Not on your lists

comp(12928..13173)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_21
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13375..15699)
DNA (2325bp) protein (775aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ84072.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
PLM1_60_b1_redo_sep16_scaffold_1045_22
unknown

Not on your lists

comp(15696..16505)
DNA (810bp) protein (270aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_23
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16498..16953)
DNA (456bp) protein (152aa)
WhiB family transcriptional regulator Tax=Saccharopolyspora spinosa RepID=UPI0002378EEB
transcriptional regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus M94.;"
PLM1_60_b1_redo_sep16_scaffold_1045_24
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16950..17276)
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EK43_9CHLR
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM1_60_b1_redo_sep16_scaffold_1045_25
unknown

Not on your lists

17524..17913
DNA (390bp) protein (130aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_26
unknown

Not on your lists

18062..18628
DNA (567bp) protein (189aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_27
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18591..19418
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3CT83_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDA44976.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1045_28
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19439..20335
DNA (897bp) protein (299aa)
Possible transport protein Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GLU9_STRC2
Possible transport protein {ECO:0000313|EMBL:EFG04957.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
transporter
PLM1_60_b1_redo_sep16_scaffold_1045_29
unknown

Not on your lists

comp(20520..20783)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1045_30
unknown

Not on your lists

comp(20904..21011)
DNA (108bp) protein (36aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00036F980F
Displaying 30 items

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