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PLM1_60_b1_redo_sep16_scaffold_4960

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_4960_1
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..136
DNA (135bp) protein (45aa)
Endonuclease DDE Tax=Mycobacterium avium 05-4293 RepID=V7JAK6_MYCAV
DDE superendonuclease family protein {ECO:0000313|EMBL:ETZ41152.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium MAV_120709_2344.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_4960_2
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(210..1460)
DNA (1251bp) protein (417aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FDR8_VERMA
putative ECF subfamily RNA polymerase sigma-24 factor
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB43599.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_4960_3
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1457..1837)
DNA (381bp) protein (127aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B53281
DGPFAETKE family protein
DGPFAETKE family protein {ECO:0000313|EMBL:ABV96867.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_4960_4
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2338..4797)
DNA (2460bp) protein (820aa)
glnD; PII uridylyl-transferase (EC:2.7.7.59)
hypothetical protein Tax=Streptomyces sp. AA0539 RepID=UPI0002EB5E64
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
PLM1_60_b1_redo_sep16_scaffold_4960_5
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4787..5125)
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II 1 Tax=Frankia sp. BMG5.12 RepID=UPI00036455E9
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EFC79033.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
nitrogen regulatory protein P-II
PLM1_60_b1_redo_sep16_scaffold_4960_6
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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comp(5125..6450)
DNA (1326bp) protein (442aa)
Ammonium transport protein (Amt family) bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ammonium transporter
Tax=CG_Solirubrobact_01
PLM1_60_b1_redo_sep16_scaffold_4960_7
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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6626..7186
DNA (561bp) protein (187aa)
GCN5-related N-acetyltransferase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAQ0_MEISD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADH62572.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
PLM1_60_b1_redo_sep16_scaffold_4960_8
unknown

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comp(7384..7515)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_4960_9
unknown

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comp(7795..8019)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_4960_trna_1
unknown

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8418..8499
DNA (82bp)
transferRNA Tyr
Displaying 10 items

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