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PLM1_60_b1_redo_sep16_scaffold_78_5

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4012..4683)

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl transferase, family 25 Tax=Frankia sp. (strain CcI3) RepID=Q2J7R7_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 225.0
  • Bit_score: 257
  • Evalue 7.50e-66
glycosyl transferase similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 225.0
  • Bit_score: 257
  • Evalue 2.10e-66
Glycosyltransferase involved in LPS biosynthesis {ECO:0000313|EMBL:KDA41229.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 225.0
  • Bit_score: 257
  • Evalue 1.10e-65

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Taxonomy

Frankia sp. BMG5.23 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGGCGACGCTGCTGCCACAGGAGCTTCGGGTCAACTTCACCTCGGACTGGAAGGGCCACTTCGACGGCCTCGACCTTGACCGCCGCGTCCTCGAAGAGACCGGCTACCGGCTGTTCCCCTGGAAGCTGCCGTCCGCCAATCCATGGTGGCACCGTTCTCTCCGACGTGGCGAGGTAGGCTGCGCGCTCAGCCACCTTGCCTGCTGGCGCGATGCAGGCGCGAACCACGAGCGCTTCGCCGTGGTGCTGGAGGATGACGTGACGCTGGCGCCGGACTTCCTCCAGCGACTCCTCGGCGGCGTCCGGTGGCTCGCCTGTCACGGGCACGCCTTCGACCTGCTCTACCTCGGACGCTGTCCTCGCGGGCGTGACCGGCCGATGGTCCCGGGCCTGGTCGTGCCAGGCTTCAGCTACGGTACCTTTGGCTATCTGCTCAGCGGCAGCGGTGTCGAGGCGATCCTCGGGGCGGGTCTCGGTCAGGCCATCTTGCCCGTGGATGAGTTCCTGCCCGCGATGTACGTCGACCATCCGCGCCCGGACGTGCGTGCCCGCTTTCCGCGGCGGCTCACCGCGCTGGCATTCGATCCCCCGCTGGTCGAGGAGTTGCCGAAGCAGGCGGCCGGCAGCGACACCCGGAGCTCCGACTTCATTGACGGCCCGCCGGACGGATAG
PROTEIN sequence
Length: 224
MATLLPQELRVNFTSDWKGHFDGLDLDRRVLEETGYRLFPWKLPSANPWWHRSLRRGEVGCALSHLACWRDAGANHERFAVVLEDDVTLAPDFLQRLLGGVRWLACHGHAFDLLYLGRCPRGRDRPMVPGLVVPGFSYGTFGYLLSGSGVEAILGAGLGQAILPVDEFLPAMYVDHPRPDVRARFPRRLTALAFDPPLVEELPKQAAGSDTRSSDFIDGPPDG*