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PLM1_60_b1_redo_sep16_scaffold_78_24

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(27206..28816)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 506.0
  • Bit_score: 634
  • Evalue 1.00e-178
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037518D7 similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 506.0
  • Bit_score: 646
  • Evalue 2.40e-182
ATP-dependent DNA ligase I similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 506.0
  • Bit_score: 634
  • Evalue 2.00e-179

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Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
GTGGCGCGGTCAGCCCGGCGGGCCGGGTGTCGCGGGGCAGGGCACAATGTGCTCGTGCTGCTGCTCGAGATCGCCGAGACCTCCGACGCCGTCGCGTCGACCTCGGCGCGCCTGGCCAAGGTCGAACGACTCGCGGCCTGCCTGCGCCTGCTCGAGCCGGCCGAGGTGGCGGTGGCGGTCGCGTTCCTCTCGGGCGAGCTGCGGCAGCGGCAGATCGGGGTGGGCTGGGCCTCGCTCCGGGAGGTGCCCGAGGCGGCCGGGTCGCCGTCGCTCACCGTGGCCGAGACCGACGCCCTGTTCGAGCTGGTGGGCAGGCAGGCAGGACCCGGGTCGCAGCGCGAGCGCCGGCGCCTGCTCTCGGGACTGCTCGGCCGGGCCACCGCCACCGAGCAGCGCTTCCTGTACCGGCTGCTGACCGGCGAGCTGCGCCAGGGCGCCCTCGACGGCGTCATGGTCGAGGCGGTGGCGCGGGCCGCCGGCGTCCCCGGCACCGAGGTCCGGCGGGCGCTGATGCTCCGCGGCGCGCTCGGTGCGGTCGCCCAGGCCGCGCTCTCGGAGGGCGTGGCCGGCCTGCGGACGTTCCGGCTGGAGATCGGCCGGGCCGTGCGCCCGATGCTGGCCCAGACCGCCGACAGCGTCGACACCGCCCTGGACGGCATCCACCCGGCCGCGGTGGAGTGGAAGCTGGATGGCGTCCGCGTCCAACTCCACAAGGAGGGCGGCGAGGTGCGCGTGTTCACCCGCACGCTGGACGACGTCACGGCGCGCGTGCCCGAGGTGGTCGAGACCATGCTGGCCCTGCCCGTCCGCTCGGCGGTGCTCGACGGCGAGCTGATCGCCCTGCAGGCCGACGGCCGGCCGCACCCGTTCCAGGTCACCGCGGGGCGGCTGGGCAGCAAGCTCGACGTGGAACGGCTGCGCGTGGCGGTGCCGCTCACGCTGTTCTTGTTCGACGCGCTCCACGTGGACGGCGAGGACCTGATCGACCGGGGCGGGGCCGAACGGTACACCGCCCTCGTCGCGGTGACCCCCGAGGCGCTGCGCGTGCCCCGGACGGTCACCGGCGACCCGGCGGCTGCGGCGGCGTTCCTGCGCGACACGCTCGCCCGCGGCCACGAGGGCGTGCTGGTCAAGTCGCTCGCCGCGCCCTACGAGGCCGGGCGGCGCGGGGCCGGGTGGGTCAAGGTCAAGCCGCGCCACACCCTCGACCTGGTCGTGCTGGCCGCCGAGTGGGGTCACGGGCGGCGCCGGGGCTGGCTGAGCAACCTGCACCTGGGCGCCCGTGACCCTGAGCAGGGCGAGTTCGTGATGCTGGGCAAGACGTTCAAGGGGCTGACCGACGAGCTGCTCGCCTGGCAGACCGAGCGCCTGCAGGAGCTGGCCGTGACCCCCACCGACGAGTACGTCGTCCGCGTCCGTCCGGAGCTGGTCGTCGAGGTGGCCTTCGACGGGGTGCAGGCGAGCCCCCGCTATCCGGGGGGCGTGGCCCTGCGCTTCGCACGCGTGCTGCGCTACCGGCCGGACAAGCGCGCCGCCGACGCGGACACCATCACCGAGGTCCGCGCGATCCACGCCGGCACGCCGCCGCGGGATCCGGGTGCGACGGGCTGA
PROTEIN sequence
Length: 537
VARSARRAGCRGAGHNVLVLLLEIAETSDAVASTSARLAKVERLAACLRLLEPAEVAVAVAFLSGELRQRQIGVGWASLREVPEAAGSPSLTVAETDALFELVGRQAGPGSQRERRRLLSGLLGRATATEQRFLYRLLTGELRQGALDGVMVEAVARAAGVPGTEVRRALMLRGALGAVAQAALSEGVAGLRTFRLEIGRAVRPMLAQTADSVDTALDGIHPAAVEWKLDGVRVQLHKEGGEVRVFTRTLDDVTARVPEVVETMLALPVRSAVLDGELIALQADGRPHPFQVTAGRLGSKLDVERLRVAVPLTLFLFDALHVDGEDLIDRGGAERYTALVAVTPEALRVPRTVTGDPAAAAAFLRDTLARGHEGVLVKSLAAPYEAGRRGAGWVKVKPRHTLDLVVLAAEWGHGRRRGWLSNLHLGARDPEQGEFVMLGKTFKGLTDELLAWQTERLQELAVTPTDEYVVRVRPELVVEVAFDGVQASPRYPGGVALRFARVLRYRPDKRAADADTITEVRAIHAGTPPRDPGATG*