ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1346_16

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(13186..13857)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: peptidoglycan-recognition protein SC2-like Tax=Takifugu rubripes RepID=UPI000298B5F2 similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 167.0
  • Bit_score: 131
  • Evalue 6.20e-28
Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000016868}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia.;" source="Poecilia formosa (Amazon molly) (Limia formosa).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 168.0
  • Bit_score: 121
  • Evalue 9.00e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Poecilia formosa → Poecilia → Cyprinodontiformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 672
ATGGCTGTTGCCATCGTTCTCCGGGCCCAGTGGAGCGCCCGGACCCCAAACAGGCGGCACCAGATCGCCACGCCAACCCCCCGCCTGTGGATTCACCACACCGCGGGCAGCGAACGCGGAGCGGCCGGCATGCGGTCGATCCAGAACGGCCACATGGACGACAAGGGCTATGCCGACATCGGCTACTCGTTCGTGGTCGACAACGCCGACGGCACCATCTTCGAGGGCCGCGGCGCTGGGATCGAAGGGGCCCATACGTTTGGCGACAACACGAAGTCGCATGCCATCTGCGTGATGGGCAACTTCGAGAACATCCAGCCGTCCACCCAGGCGATCGCCTCGGTCGTCGCGCTCGCGCGTCATGGCCGGGAGATGGGCTGGTGGGTCCCGACGTGTCATGGGCACCGGGAAGCCCCCCGCGCCAGTACCGCCTGCCCCGGCGCCAACTTGTTCGCCCGCCTGGGCGAGATCCGCACCAAGGTCGGTGGACCGGGCGGGACCCCCGCCACGGTCCCTACACCGGAGGAGGCCGACGTGACGGAAGAAGAGCTGCGCGCGGTCGTACGCGAGGAGGTCAAGAACGTGCTCGACAGCCAGGCCCGCAGGGTCCAGGGCATCGTCTCGTGGGAGCGTTACCTTGAGGTGCTCCTCGAAGCCGCCCGCAAGGACTGA
PROTEIN sequence
Length: 224
MAVAIVLRAQWSARTPNRRHQIATPTPRLWIHHTAGSERGAAGMRSIQNGHMDDKGYADIGYSFVVDNADGTIFEGRGAGIEGAHTFGDNTKSHAICVMGNFENIQPSTQAIASVVALARHGREMGWWVPTCHGHREAPRASTACPGANLFARLGEIRTKVGGPGGTPATVPTPEEADVTEEELRAVVREEVKNVLDSQARRVQGIVSWERYLEVLLEAARKD*