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PLM1_60_b1_redo_sep16_scaffold_1346

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1346_1
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1389)
DNA (1389bp) protein (463aa)
serine recombinase Tax=Ornithinimicrobium pekingense RepID=UPI0003B640CC
Serine recombinase {ECO:0000313|EMBL:KHL00969.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
resolvase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1346_2
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1399..1674)
DNA (276bp) protein (92aa)
Putative magnesium chelatase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HGU4_ACTM4
putative magnesium chelatase
Putative magnesium chelatase {ECO:0000313|EMBL:BAL92231.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_1346_3
unknown

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comp(1819..1989)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1346_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2459..2824
DNA (366bp) protein (122aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VX43_9ACTO
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM1_60_b1_redo_sep16_scaffold_1346_5
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2933..4471)
DNA (1539bp) protein (513aa)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI000364CECC
Helix-turn-helix domain protein {ECO:0000313|EMBL:EFC84056.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
HTH-type transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1346_6
unknown

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4654..5025
DNA (372bp) protein (124aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1346_7
unknown

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5420..5557
DNA (138bp) protein (46aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1346_8
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5905..6387
DNA (483bp) protein (161aa)
hypothetical membrane protein, partial Tax=Gemmata obscuriglobus RepID=UPI00016C4058
DNA primase {ECO:0000313|EMBL:KJS54613.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
DNA primase
PLM1_60_b1_redo_sep16_scaffold_1346_9
unknown

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7014..7400
DNA (387bp) protein (129aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1346_10
unknown

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7717..8079
DNA (363bp) protein (121aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1346_11
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8216..9136)
DNA (921bp) protein (307aa)
DNA polymerase III subunit epsilon Tax=Clostridium sporogenes PA 3679 RepID=G9F4Y5_CLOSG
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EHN13447.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
Exonuclease RNase T and DNA polymerase III
PLM1_60_b1_redo_sep16_scaffold_1346_12
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9525..10385)
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Dermacoccus sp. Ellin185 RepID=E3B9N1_9MICO
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95007.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1346_13
unknown

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comp(10601..11152)
DNA (552bp) protein (184aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1346_14
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11365..12282)
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B118_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH07648.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_1346_15
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12424..12984)
DNA (561bp) protein (187aa)
lytic transglycosylase Tax=Saccharopolyspora spinosa RepID=UPI0002379DFB
Lytic transglycosylase {ECO:0000313|EMBL:KEI45738.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
lytic transglycosylase
PLM1_60_b1_redo_sep16_scaffold_1346_16
Poecilia formosa, Poecilia, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

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comp(13186..13857)
DNA (672bp) protein (224aa)
PREDICTED: peptidoglycan-recognition protein SC2-like Tax=Takifugu rubripes RepID=UPI000298B5F2
Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000016868}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia.;" source="Poecilia formosa (Amazon molly) (Limia formosa).;"
PLM1_60_b1_redo_sep16_scaffold_1346_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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14384..15301
DNA (918bp) protein (306aa)
Aldo/keto reductase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ27_CONWI
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADB49901.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_1346_18
unknown

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comp(15292..15492)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1346_19
unknown

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comp(15563..15748)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1346_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16001..16594)
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:EXG82257.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_1346_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16626..17390)
DNA (765bp) protein (255aa)
LamB/YcsF family protein Tax=Brevibacillus panacihumi W25 RepID=V6MBG4_9BACL
LamB/YcsF family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM1_60_b1_redo_sep16_scaffold_1346_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17411..18046)
DNA (636bp) protein (212aa)
Molybdopterin dehydrogenase FAD-binding protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SH36_THEM7
molybdopterin dehydrogenase FAD-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_60_b1_redo_sep16_scaffold_1346_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18043..19581)
DNA (1539bp) protein (513aa)
4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (HcrC/hcrA) Tax=Sulfobacillus acidophilus RepID=F8I9A2_SULAT
ygeS; 4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (hcrC/hcrA)
4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (HcrC/hcrA) {ECO:0000313|EMBL:AEJ40192.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain TPY).;"
Displaying 23 items

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