ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2425_24

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 16967..17248

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family Tax=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) RepID=C8NSA1_COREF similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 98.0
  • Bit_score: 131
  • Evalue 3.40e-28
transposase similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 98.0
  • Bit_score: 131
  • Evalue 9.60e-29
Putative transposase {ECO:0000313|EMBL:BAC18631.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM; 11189 / NBRC 100395).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 98.0
  • Bit_score: 131
  • Evalue 4.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Corynebacterium efficiens → Corynebacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 282
GTGTTTGCGGGGCTGGTCGACGCGCTCGGCGCGGCGCTGGTCCGCCCCGACCGGGCCGACGAGCCCCGCCGCTTCGGCGCGCTGGGCTGGATCCGCCAGCGGGTGGAGAGCGTCTTTGACACCCTCAAAGACCAGCTGTCGCTGGAACGCCACGACGGTCGCACCCTGGGCGGCATCTACGCCCGTGTCACCCAGCGGCTGCTCGCCCTGGCCGCCGGGGTCTGGTTCAACTGGCAGCTCGACCAGCCCGACAAGCGCTCCCTGGTCGCCTACGACCACTGA
PROTEIN sequence
Length: 94
VFAGLVDALGAALVRPDRADEPRRFGALGWIRQRVESVFDTLKDQLSLERHDGRTLGGIYARVTQRLLALAAGVWFNWQLDQPDKRSLVAYDH*