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PLM4_90_b2_sep16_scaffold_897

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_897_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..359
DNA (357bp) protein (119aa)
Phosphate ABC transporter permease protein bin=GWB2_Nitrospirae_rel_47_37 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
phosphate ABC transporter permease
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

362..1294
DNA (933bp) protein (311aa)
Phosphate ABC transporter, permease protein bin=GWB2_Nitrospirae_rel_47_37 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
phosphate ABC transporter, inner membrane subunit PstA
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1296..2087
DNA (792bp) protein (264aa)
Phosphate ABC transporter, ATPase subunit bin=GWF2_Nitrospirae_44_13 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
phosphate ABC transporter ATPase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2099..2773
DNA (675bp) protein (225aa)
Phosphate transport system regulatory protein PhoU bin=GWF2_Planctomycete_41_51 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
PhoU family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2897..4039
DNA (1143bp) protein (381aa)
arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase (EC:2.6.1.-)
DegT/DnrJ/EryC1/StrS aminotransferase bin=GWF2_Lentisphaerae_57_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4036..5598
DNA (1563bp) protein (521aa)
Apolipoprotein N-acyltransferase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3L6_GEODF
lnt; apolipoprotein N-acyltransferase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5786..6217
DNA (432bp) protein (144aa)
50S ribosomal protein L13 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
rplM; 50S ribosomal protein L13
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6244..6636
DNA (393bp) protein (131aa)
30S ribosomal protein S9 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rpsI; 30S ribosomal protein S9
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6695..7729
DNA (1035bp) protein (345aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7738..8337)
DNA (600bp) protein (200aa)
Zinc metalloprotease Tax=Oceanibaculum indicum P24 RepID=K2K265_9PROT
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_11
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8366..9280)
DNA (915bp) protein (305aa)
Putative Zn-dependent protease Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YJ39_METFJ
Zn-dependent protease
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b2_sep16_scaffold_897_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9500..10096
DNA (597bp) protein (199aa)
Metallo-beta-lactamase superfamily protein bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
metallo-beta-lactamase superfamily protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10062..10220
DNA (159bp) protein (53aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_897_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10238..10690
DNA (453bp) protein (151aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta bin=GWB2_Proteobacteria_55_19 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 14 items

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