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PLM4_90_b2_sep16_scaffold_296

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_296_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..356)
DNA (354bp) protein (118aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_296_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(455..1819)
DNA (1365bp) protein (455aa)
Diguanylate cyclase bin=GWC2_Deltaproteobacteria_42_51 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
diguanylate cyclase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_296_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2131..2517)
DNA (387bp) protein (129aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_296_4
unknown

Not on your lists

2656..2886
DNA (231bp) protein (77aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_296_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2870..3538
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FT56_9DELT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_296_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3730..4767
DNA (1038bp) protein (346aa)
Cell shape-determining protein MreB bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
mreB; rod shape-determining protein MreB
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_296_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4773..5660
DNA (888bp) protein (296aa)
Cell shape-determining protein MreC Tax=uncultured Desulfobacterium sp. RepID=E1YLF9_9DELT
rod shape-determining protein MreC
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_296_8
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5657..6181
DNA (525bp) protein (175aa)
Hypothetical membrane protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQZ3_SYNAS
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_296_9
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6185..8059
DNA (1875bp) protein (625aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 bin=GWC2_Deltaproteobacteria_42_51 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_296_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8049..9149
DNA (1101bp) protein (367aa)
Rod shape-determining protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQZ1_SYNAS
rod shape-determining protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_296_11
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9240..9668)
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein bin=GWB2_Proteobacteria_55_19 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
single-strand binding protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_296_12
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10077..10649
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=uncultured bacterium 4050020-J15 RepID=S4W9T1_9BACT
trx-1; TlpA family-like protein disulfide reductase lipoprotein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_296_13
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10816..13155
DNA (2340bp) protein (780aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAE2_GEOUR
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_296_14
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13246..14157
DNA (912bp) protein (304aa)
GTPase Era Tax=Syntrophus aciditrophicus (strain SB) RepID=ERA_SYNAS
GTP-binding protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_296_15
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14169..15077
DNA (909bp) protein (303aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_296_16
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15102..15593
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AD20_THEID
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_296_17
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15890..16312)
DNA (423bp) protein (141aa)
id=14627140 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 17 items

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