ggKbase home page

PLM4_90_b2_sep16_scaffold_1413

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1413_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..337)
DNA (336bp) protein (112aa)
Xylose isomerase-like protein Tax=Jannaschia sp. (strain CCS1) RepID=Q28MT0_JANSC
xylose isomerase-like protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1413_2
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(458..2335)
DNA (1878bp) protein (626aa)
TRAP dicarboxylate transporter, DctM subunit bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
TRAP dicarboxylate transporter subunit DctM
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
PLM4_90_b2_sep16_scaffold_1413_3
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2426..3466)
DNA (1041bp) protein (347aa)
TRAP dicarboxylate transporter, DctP subunit Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPA6_SYNFM
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABK19258.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM4_90_b2_sep16_scaffold_1413_4
unknown

Not on your lists

comp(3572..3805)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_1413_5
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3827..4555)
DNA (729bp) protein (243aa)
Asp/Glu/hydantoin racemase Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EED6_GEOS4
Asp/Glu/hydantoin racemase
Asp/Glu/hydantoin racemase {ECO:0000313|EMBL:ACX65266.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
PLM4_90_b2_sep16_scaffold_1413_6
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(4673..5224)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Chthonomonas calidirosea T49 RepID=S0EWY4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCW35895.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
PLM4_90_b2_sep16_scaffold_1413_7
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5241..6677)
DNA (1437bp) protein (479aa)
Type III effector Hrp-dependent outers Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EED4_GEOS4
Hrp-dependent type III effector protein
Type III effector Hrp-dependent outers {ECO:0000313|EMBL:ACX65264.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
PLM4_90_b2_sep16_scaffold_1413_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..6876)
DNA (213bp) protein (71aa)
hypothetical protein Tax=Zymophilus raffinosivorans RepID=UPI000378C4E4
ribulose bisphosphate carboxylase-like protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 8 items

View Taxonomy