ggKbase home page

PLM4_90_b2_sep16_scaffold_648

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_648_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..350
DNA (348bp) protein (116aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_648_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(459..767)
DNA (309bp) protein (103aa)
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_648_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(819..1859)
DNA (1041bp) protein (347aa)
Diguanylate cyclase with GAF sensor Tax=Thermincola potens (strain JR) RepID=D5XCW1_THEPJ
GAF sensor-containing diguanylate cyclase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_648_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1874..2272)
DNA (399bp) protein (133aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_648_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2282..3007)
DNA (726bp) protein (242aa)
SNARE associated Golgi protein-like protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJA3_DESAR
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_648_trna_3
unknown

Not on your lists

comp(3154..3228)
DNA (75bp)
transferRNA Glu
PLM4_90_b2_sep16_scaffold_648_6
unknown

Not on your lists

3261..3449
DNA (189bp) protein (63aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_648_trna_2
unknown

Not on your lists

comp(3388..3460)
DNA (73bp)
transferRNA Lys
PLM4_90_b2_sep16_scaffold_648_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3689..4990)
DNA (1302bp) protein (434aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=PURA_GEODF
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_648_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5062..6654)
DNA (1593bp) protein (531aa)
D-3-phosphoglycerate dehydrogenase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
D-3-phosphoglycerate dehydrogenase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_648_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6690..7829)
DNA (1140bp) protein (380aa)
sgaA; serine-glyoxylate transaminase (EC:2.6.1.45)
Serine--glyoxylate transaminase bin=GWC2_Deltaproteobacteria_42_51 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_648_10
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7972..8226
DNA (255bp) protein (85aa)
Tetratricopeptide repeat-containing protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_648_11
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8226..9308
DNA (1083bp) protein (361aa)
Prolidase family protein Tax=Geobacter sulfurreducens RepID=D7AKL4_GEOSK
integrase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_648_trna_1
unknown

Not on your lists

9402..9474
DNA (73bp)
transferRNA Gly
PLM4_90_b2_sep16_scaffold_648_12
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9570..9872
DNA (303bp) protein (101aa)
Histone family protein DNA-binding protein bin=GWA2_Ignavibacteria_55_11 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
histone-like DNA-binding protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 15 items

View Taxonomy