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PLM4_90_b2_sep16_scaffold_1065

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1065_1
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(225..533)
DNA (309bp) protein (103aa)
transposase IS200-like protein
Transposase IS200-family protein bin=GWF2_Bacteroidetes_33_16 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM4_90_b2_sep16_scaffold_1065_trna_3
unknown

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comp(919..993)
DNA (75bp)
transferRNA Glu
PLM4_90_b2_sep16_scaffold_1065_trna_2
unknown

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comp(1205..1277)
DNA (73bp)
transferRNA Lys
PLM4_90_b2_sep16_scaffold_1065_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1326..2636)
DNA (1311bp) protein (437aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=PURA_GEODF
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1065_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2666..4258)
DNA (1593bp) protein (531aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1065_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4346..5485)
DNA (1140bp) protein (380aa)
serine--glyoxylate transaminase (EC:2.6.1.45) bin=bin1_lowGC species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
sgaA; serine-glyoxylate transaminase (EC:2.6.1.45)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1065_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5679..5933
DNA (255bp) protein (85aa)
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_1065_6
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5930..7015
DNA (1086bp) protein (362aa)
Peptidase M24 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF09_GEOUR
peptidase M24
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_1065_trna_1
unknown

Not on your lists

7150..7222
DNA (73bp)
transferRNA Gly
Displaying 9 items

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