ggKbase home page

PLM4_90_b2_sep16_scaffold_1307

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1307_1
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1241)
DNA (1239bp) protein (413aa)
hemG; protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] bin=GWC2_NOV_55_46 species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hemG; protoporphyrinogen oxidase (EC:1.3.3.4)
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_1307_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1336..2268)
DNA (933bp) protein (311aa)
hemH; ferrochelatase (EC:4.99.1.1)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00036A85E6
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1307_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2300..3340)
DNA (1041bp) protein (347aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase bin=GWC2_Deltaproteobacteria_56_8 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1307_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3673..5178)
DNA (1506bp) protein (502aa)
cytosol aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_1307_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5421..6626)
DNA (1206bp) protein (402aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0X3_METPS
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_1307_6
bacterium UASB270, Bacteria

Not on your lists

6866..7114
DNA (249bp) protein (83aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria.;" source="bacterium UASB270.;"
signal peptidase I. Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Signal peptidase I Tax=Pedosphaera parvula Ellin514 RepID=B9XH90_9BACT
Displaying 6 items

View Taxonomy