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PLM4_90_b2_sep16_scaffold_1712

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1712_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..334)
DNA (333bp) protein (111aa)
Scaffold protein Tax=Clostridium ultunense Esp RepID=M1ZGM8_9CLOT
FeS cluster assembly scaffold protein NifU
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1712_2
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(445..1851)
DNA (1407bp) protein (469aa)
Response regulator of zinc sigma-54-dependent two-component system Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WEW2_9SPIO
Response regulator of zinc sigma-54-dependent two-component system
Tax=RBG_16_NC10_65_8_curated
PLM4_90_b2_sep16_scaffold_1712_3
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1848..3971)
DNA (2124bp) protein (708aa)
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase, contains GAF domain Tax=Candidatus Nitrospira defluvii RepID=D8PBW7_9BACT
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM4_90_b2_sep16_scaffold_1712_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4199..5116
DNA (918bp) protein (306aa)
Lipid A biosynthesis acyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipid A biosynthesis acyltransferase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1712_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5307..5888
DNA (582bp) protein (194aa)
phosphoheptose isomerase (EC:5.-.-.-)
Phosphoheptose isomerase Tax=uncultured bacterium RepID=K1WXK6_9BACT
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1712_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6231..6410
DNA (180bp) protein (60aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1712_7
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6394..7278
DNA (885bp) protein (295aa)
Uncharacterized protein Tax=Haloferax larsenii JCM 13917 RepID=M0H922_9EURY
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_1712_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7253..8212
DNA (960bp) protein (320aa)
Ppx/GppA phosphatase (EC:3.6.1.40 3.6.1.11)
Ppx/GppA phosphatase bin=GWB2_Ignavibacteria_35_12 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1712_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8308..8568)
DNA (261bp) protein (87aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1712_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8684..8863)
DNA (180bp) protein (60aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1712_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8909..9274)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3V1_GEODF
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1712_12
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9516..11516
DNA (2001bp) protein (667aa)
CoA-binding domain protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FN91_DESAA
CoA-binding domain-containing protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 12 items

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