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PLM4_90_b2_sep16_scaffold_1952

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1952_1
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112..573)
DNA (462bp) protein (154aa)
SsrA-binding protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CAT9_DESTA
SsrA-binding protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1952_2
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(815..1270)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00036F0A28
histidine kinase
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_1952_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1423..2871)
DNA (1449bp) protein (483aa)
Sensor histidine kinase, HAMP and PAS domain-containing Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A224_PELCD
sensor histidine kinase, HAMP and PAS domain-containing
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1952_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2949..3521)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F5S2_9DELT
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1952_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3734..4144
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LHW2_9ACTO
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_1952_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4149..4646)
DNA (498bp) protein (166aa)
Ribonuclease H Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TYV8_9DELT
ribonuclease H
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1952_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4592..5071)
DNA (480bp) protein (160aa)
Conserved uncharacterized protein, DUF164 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NHV7_DESTT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1952_trna_1
unknown

Not on your lists

comp(5475..5547)
DNA (73bp)
transferRNA Met
PLM4_90_b2_sep16_scaffold_1952_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5654..7141)
DNA (1488bp) protein (496aa)
RNA polymerase sigma factor RpoD Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0M6_GEODF
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1952_9
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7290..9164)
DNA (1875bp) protein (625aa)
DNA primase Tax=Bacteria RepID=B5EDQ9_GEOBB
dnaG; DNA primase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1952_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9202..11553)
DNA (2352bp) protein (784aa)
MutS2 protein bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
MutS2 protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1952_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11595..12041)
DNA (447bp) protein (149aa)
hypothetical protein; K09117 hypothetical protein bin=GWC2_NOV_55_46 species=Selenomonas sp. oral taxon 138 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1952_12
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12045..12269)
DNA (225bp) protein (75aa)
30S ribosomal protein S21 2 Tax=Geobacter sulfurreducens RepID=RS212_GEOSL
rpsU-2; 30S ribosomal protein S21
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1952_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12515..13090
DNA (576bp) protein (192aa)
acyl-CoA dehydrogenase Tax=Sulfobacillus thermosulfidooxidans RepID=UPI000300B769
acyl-CoA dehydrogenase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 14 items

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