ggKbase home page

PLM4_90_b2_sep16_scaffold_2016

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_2016_1
unknown

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_2016_2
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..867)
DNA (744bp) protein (248aa)
GspJ2 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QK73_DESAH
gspJ2; protein GspJ2
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_2016_3
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(851..1414)
DNA (564bp) protein (188aa)
Prepilin-type N-terminal cleavage/methylation domain protein Tax=delta proteobacterium NaphS2 RepID=D8EYG2_9DELT
general secretion pathway protein H
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_2016_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1468..1971)
DNA (504bp) protein (168aa)
Putative general secretion pathway protein H Tax=delta proteobacterium NaphS2 RepID=D8EYG1_9DELT
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_2016_5
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1968..2408)
DNA (441bp) protein (147aa)
GspG2 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QK81_DESAH
gspG2; protein GspG2
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_90_b2_sep16_scaffold_2016_6
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2426..3640)
DNA (1215bp) protein (405aa)
General secretion pathway protein F Tax=delta proteobacterium NaphS2 RepID=D8EYF9_9DELT
gspF; general secretory pathway component, cryptic
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_2016_7
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3648..5357)
DNA (1710bp) protein (570aa)
General secretory pathway protein E Tax=delta proteobacterium NaphS2 RepID=D8EYF8_9DELT
General secretion pathway protein E (Type II traffic warden ATPase)
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_2016_8
unknown

Not on your lists

5419..5610
DNA (192bp) protein (64aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_2016_9
unknown

Not on your lists

5818..5919
DNA (102bp) protein (34aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_2016_10

Not on your lists

6034..6279
DNA (246bp) protein (82aa)
Marine sediment metagenome DNA, contig: S03H2_S13055 {ECO:0000313|EMBL:GAH67551.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Saccharomonospora xinjiangensis genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
PLM4_90_b2_sep16_scaffold_2016_11
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6462..7142
DNA (681bp) protein (227aa)
Putative uncharacterized protein bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
putative DNA alkylation repair enzyme
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_2016_12
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7241..7417)
DNA (177bp) protein (59aa)
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_2016_13
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

7600..7755
DNA (156bp) protein (52aa)
hypothetical protein Tax=Balneola vulgaris RepID=UPI00037BCCA6
chromate ion transporter
Tax=RBG_13_Nitrospirae_43_8_curated
Displaying 13 items

View Taxonomy