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PLM4_90_b2_sep16_scaffold_2037

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_2037_trna_1
unknown

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comp(108..181)
DNA (74bp)
transferRNA Pro
PLM4_90_b2_sep16_scaffold_2037_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(377..844)
DNA (468bp) protein (156aa)
UPF0145 protein Desor_2039 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WF37_DESOD
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_2037_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(902..1297)
DNA (396bp) protein (132aa)
MerR family transcriptional regulator
Transcriptional regulator, MerR family bin=GWC2_Deltaproteobacteria_55_46 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_2037_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1369..1653)
DNA (285bp) protein (95aa)
Integration host factor subunit alpha Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=IHFA_ANADF
integration host factor subunit alpha
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_2037_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1886..4294)
DNA (2409bp) protein (803aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_2037_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4363..5427)
DNA (1065bp) protein (355aa)
Phenylalanine--tRNA ligase alpha subunit Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=SYFA_GEODF
pheS; phenylalanyl-tRNA synthetase subunit alpha
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_2037_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5563..5880)
DNA (318bp) protein (106aa)
50S ribosomal protein L20 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRM1_9DELT
50S ribosomal protein L20
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 7 items

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