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PLM4_90_coex_sep16_scaffold_75

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_75_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..421)
DNA (420bp) protein (140aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWS2_SYNAS
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(418..771)
DNA (354bp) protein (118aa)
Rho termination factor domain protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7U6E6_DESML
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

994..1293
DNA (300bp) protein (100aa)
glutaredoxin-like protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
glutaredoxin
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1283..1804
DNA (522bp) protein (174aa)
rubredoxin; K00535 [EC:1.18.-.-] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Rubredoxin
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1952..2566
DNA (615bp) protein (205aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00035D418F
lytic transglycosylase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2563..3120
DNA (558bp) protein (186aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDP3_DESAR
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3159..4145)
DNA (987bp) protein (329aa)
ABC transporter, ATP-binding protein Tax=delta proteobacterium NaphS2 RepID=D8F8B4_9DELT
oligopeptide/dipeptide ABC transporter ATPase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4132..5118)
DNA (987bp) protein (329aa)
ABC transporter, ATP-binding protein Tax=delta proteobacterium NaphS2 RepID=D8F8B3_9DELT
oligopeptide/dipeptide ABC transporter ATPase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_9
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5121..6296)
DNA (1176bp) protein (392aa)
Putative oligopeptide ABC transporter, permease protein AppC Tax=delta proteobacterium NaphS2 RepID=D8F8B2_9DELT
binding-protein-dependent transport system inner membrane protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_75_10
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6293..7252)
DNA (960bp) protein (320aa)
Putative oligopeptide ABC transporter, permease protein AppB Tax=delta proteobacterium NaphS2 RepID=D8F8B1_9DELT
binding-protein-dependent transport systems inner membrane component
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_75_11
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7252..9396)
DNA (2145bp) protein (715aa)
Putative oligopeptide ABC transporter, oligopeptide-binding protein AppA Tax=delta proteobacterium NaphS2 RepID=D8F8B0_9DELT
family 5 extracellular solute-binding protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_75_trna_1
unknown

Not on your lists

9603..9675
DNA (73bp)
transferRNA Met
PLM4_90_coex_sep16_scaffold_75_12
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9903..10616
DNA (714bp) protein (238aa)
hypothetical protein Tax=Thermodesulfatator atlanticus RepID=UPI0003B6DECC
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_75_13
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10670..11092
DNA (423bp) protein (141aa)
ribonuclease H Tax=Hippea alviniae RepID=UPI0003B46132
ribonuclease H
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_75_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11484..12053
DNA (570bp) protein (190aa)
Conserved hypothetical membrane protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJL5_SYNFM
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12050..14347
DNA (2298bp) protein (766aa)
PAS/PAC sensor signal transduction histidine kinase bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
sensor histidine kinase, HAMP and PAS domain-containing
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14437..14871
DNA (435bp) protein (145aa)
SsrA-binding protein Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L4G9_9BACI
smpB; SsrA-binding protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15411..16043
DNA (633bp) protein (211aa)
Non-canonical purine NTP pyrophosphatase Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CYB8_HALOH
non-canonical purine NTP pyrophosphatase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_trna_2
unknown

Not on your lists

16100..16173
DNA (74bp)
transferRNA Pro
PLM4_90_coex_sep16_scaffold_75_trna_3
unknown

Not on your lists

16245..16318
DNA (74bp)
transferRNA Arg
PLM4_90_coex_sep16_scaffold_75_trna_4
unknown

Not on your lists

16337..16408
DNA (72bp)
transferRNA His
PLM4_90_coex_sep16_scaffold_75_trna_5
unknown

Not on your lists

16425..16498
DNA (74bp)
transferRNA Arg
PLM4_90_coex_sep16_scaffold_75_trna_6
unknown

Not on your lists

16508..16580
DNA (73bp)
transferRNA Lys
PLM4_90_coex_sep16_scaffold_75_trna_7
unknown

Not on your lists

16617..16701
DNA (85bp)
transferRNA Leu
PLM4_90_coex_sep16_scaffold_75_18
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16728..18002
DNA (1275bp) protein (425aa)
Trigger factor Tax=Geobacter uraniireducens (strain Rf4) RepID=TIG_GEOUR
trigger factor
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_75_19
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18016..18615
DNA (600bp) protein (200aa)
ATP-dependent Clp protease proteolytic subunit bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATP-dependent Clp protease, proteolytic subunit ClpP
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_20
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18738..19727
DNA (990bp) protein (330aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEF0_SYNFM
clpX; ATP-dependent protease ATP-binding subunit ClpX
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_75_trna_8
unknown

Not on your lists

19903..19975
DNA (73bp)
transferRNA Val
PLM4_90_coex_sep16_scaffold_75_21
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20208..21362
DNA (1155bp) protein (385aa)
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_90_coex_sep16_scaffold_75_trna_9
unknown

Not on your lists

21543..21617
DNA (75bp)
transferRNA Asp
Displaying items 1-30 of 36 in total

View Taxonomy