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PLM4_90_coex_sep16_scaffold_126

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_126_1
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..979)
DNA (978bp) protein (326aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_126_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(976..2076)
DNA (1101bp) protein (367aa)
Cell division protein FtsW bin=GWB2_Proteobacteria_55_19 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
stage V sporulation protein E
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2073..3467)
DNA (1395bp) protein (465aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Geobacter sp. (strain M18) RepID=E8WSG4_GEOS8
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3464..4534)
DNA (1071bp) protein (357aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] bin=bin3_NC10 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4545..5966)
DNA (1422bp) protein (474aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase (EC:6.3.2.-)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWC2_Deltaproteobacteria_42_51 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5963..7504)
DNA (1542bp) protein (514aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7452..9404)
DNA (1953bp) protein (651aa)
Peptidoglycan transglycosylase and transpeptidase FtsI Tax=Geobacter metallireducens RepID=Q39YM5_GEOMG
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9401..9754)
DNA (354bp) protein (118aa)
Cell division protein FtsL Tax=uncultured bacterium RepID=K1YZP1_9BACT
ftsL; cell division septum formation protein FtsL
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9797..10213)
DNA (417bp) protein (139aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10232..11170)
DNA (939bp) protein (313aa)
Ribosomal RNA small subunit methyltransferase H Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQF6_KYRT2
S-adenosyl-methyltransferase MraW
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11167..11613)
DNA (447bp) protein (149aa)
Protein MraZ bin=GWC2_Deltaproteobacteria_42_51 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
MraZ protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11793..12596)
DNA (804bp) protein (268aa)
Sec-independent protein translocase protein TatC Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LG39_SYNFM
Sec-independent protein translocase subunit TatC
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12600..12917)
DNA (318bp) protein (106aa)
Sec-independent protein translocase protein TatA Tax=Geobacter sp. (strain M18) RepID=E8WR08_GEOS8
twin-arginine translocation protein, TatA/E family subunit
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_14
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13001..13753)
DNA (753bp) protein (251aa)
Beta-lactamase domain protein bin=GWC2_Proteo_65_14_Ab886 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
beta-lactamase domain-containing protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_126_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14233..14631)
DNA (399bp) protein (133aa)
Death-on-curing family protein bin=GWA2_Ignavibacteria_55_11 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
death-on-curing family protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14631..14855)
DNA (225bp) protein (75aa)
Addiction module antidote bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative addiction module antidote
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15102..15893
DNA (792bp) protein (264aa)
Nif-specific regulatory protein bin=GWF2_Lentisphaerae_57_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
gnfM; nitrogen fixation master sigma-54-dependent transcriptional response regulator
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_126_18
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15890..16957)
DNA (1068bp) protein (356aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHE4_THEYD
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_126_19
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17070..17702)
DNA (633bp) protein (211aa)
Sua5/yciO/yrdC/ywlC family protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
sua5/yciO/yrdC/ywlC family protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_126_20
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17709..18218)
DNA (510bp) protein (170aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] bin=GWC2_NOV_55_46 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
purE-2; 5-carboxyamino-1-(5-phosphoribosyl)imidazole carboxymutase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
Displaying 20 items

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