ggKbase home page

PLM4_90_coex_sep16_scaffold_810

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_810_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..191)
DNA (189bp) protein (63aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..1079)
DNA (867bp) protein (289aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Short chain dehydrogenase/reductase family oxidoreductase bin=GWC2_Syntrophobacterales_56_13 species=Streptomyces griseoflavus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_3
unknown

Not on your lists

1094..1669
DNA (576bp) protein (192aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_810_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1954..2451)
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Desulfovibrio sp. X2 RepID=S7U0Z4_9DELT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2523..2810)
DNA (288bp) protein (96aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2852..3223)
DNA (372bp) protein (124aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3384..4094)
DNA (711bp) protein (237aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4200..4502)
DNA (303bp) protein (101aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4558..5157)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRU0_ACCPU
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_coex_sep16_scaffold_810_10
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5174..6073)
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZK9_SOLUE
cation diffusion facilitator family transporter
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_810_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6177..6434)
DNA (258bp) protein (86aa)
Uncharacterized protein bin=GWB2_Geobacter-like_52_12 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6471..8291)
DNA (1821bp) protein (607aa)
GTP-binding protein TypA bin=GWD2_RBX1-related_39_127 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GTP-binding protein TypA
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8495..9316)
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4C6_CALAS
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_14
unknown

Not on your lists

9416..9580
DNA (165bp) protein (55aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_810_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9577..10233
DNA (657bp) protein (219aa)
Putative cell division ABC transporter ATP-binding protein FtsE Tax=Myxococcus RepID=F8CND9_MYXFH
putative cell division ABC transporter ATP-binding protein FtsE
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10241..11131
DNA (891bp) protein (297aa)
Cell division protein FtsX Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GFB8_GEOUR
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11135..11590
DNA (456bp) protein (152aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_18
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11641..12174
DNA (534bp) protein (178aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_810_19
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12198..13187
DNA (990bp) protein (330aa)
Periplasmic carboxy-terminal processing protease Tax=Geobacter metallireducens RepID=Q39UJ2_GEOMG
ctpA-2; periplasmic carboxy-terminal processing protease
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 19 items

View Taxonomy