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PLM4_90_coex_sep16_scaffold_5341

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_5341_1

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2..139
DNA (138bp) protein (46aa)
Integrase catalytic region (Fragment) Tax=mine drainage metagenome RepID=T1C3Z3_9ZZZZ
Integrase catalytic region {ECO:0000313|EMBL:EQD76712.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM4_90_coex_sep16_scaffold_5341_2
unknown

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260..778
DNA (519bp) protein (173aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_5341_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1066..2046)
DNA (981bp) protein (327aa)
Molybdenum cofactor biosynthesis protein A, archaea Tax=mine drainage metagenome RepID=T0YWY9_9ZZZZ
GTP cyclohydrolase subunit moaa
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM4_90_coex_sep16_scaffold_5341_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2235..2621)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2R0U1_METFO
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:KCZ70913.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PIN domain-containing protein
PLM4_90_coex_sep16_scaffold_5341_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2608..2844)
DNA (237bp) protein (79aa)
Transcriptional regulator AbrB family protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2QX09_METFO
AbrB family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
PLM4_90_coex_sep16_scaffold_5341_6

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3137..3655
DNA (519bp) protein (173aa)
Single-stranded DNA-binding protein (Fragment) Tax=mine drainage metagenome RepID=T0ZIN9_9ZZZZ
Single-stranded DNA-binding protein {ECO:0000313|EMBL:EQD29705.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
OB-fold nucleic acid binding protein
PLM4_90_coex_sep16_scaffold_5341_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3708..4592)
DNA (885bp) protein (295aa)
short chain dehydrogenase (EC:1.1.1.62)
Short-chain dehydrogenase/reductase SDR Tax=Halobacterium sp. DL1 RepID=G4IHV3_9EURY
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM4_90_coex_sep16_scaffold_5341_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4840..5142
DNA (303bp) protein (101aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJ95_DESPD
4Fe-4S ferredoxin
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM4_90_coex_sep16_scaffold_5341_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5139..6284
DNA (1146bp) protein (382aa)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha Tax=uncultured Acidobacteria bacterium RepID=H5SH67_9BACT
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 9 items

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