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PLM4_90_coex_sep16_scaffold_2688

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_2688_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..743)
DNA (741bp) protein (247aa)
2-dehydro-3-deoxyphosphooctonate aldolase bin=GWA2_Deltaproteo_65_63 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
2-dehydro-3-deoxyphosphooctonate aldolase
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM4_90_coex_sep16_scaffold_2688_2
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(740..2332)
DNA (1593bp) protein (531aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM4_90_coex_sep16_scaffold_2688_3
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2311..3033)
DNA (723bp) protein (241aa)
3-deoxy-manno-octulosonate cytidylyltransferase bin=GWC2_Proteo_65_14_Ab886 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM4_90_coex_sep16_scaffold_2688_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3057..4097)
DNA (1041bp) protein (347aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase bin=GWC2_Deltaproteobacteria_66_88 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM4_90_coex_sep16_scaffold_2688_5
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4147..4368)
DNA (222bp) protein (74aa)
id=14624571 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=CSP1_8_Deltaproteobacteria
PLM4_90_coex_sep16_scaffold_2688_6
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4603..4995)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
rpsI; 30S ribosomal protein S9
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM4_90_coex_sep16_scaffold_2688_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5000..5446)
DNA (447bp) protein (149aa)
50S ribosomal protein L13 bin=GWC2_Proteo_65_14_Ab886 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
rplM; 50S ribosomal protein L13
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM4_90_coex_sep16_scaffold_2688_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5513..5752)
DNA (240bp) protein (80aa)
truA; tRNA pseudouridine synthase a (EC:5.4.99.12)
tRNA pseudouridine synthase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092Z4_STIAD
Tax=RBG_16_Deltaproteobacteria_64_85_curated
Displaying 8 items

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