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PLM4_5_b1_sep16_scaffold_3

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Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..412)
DNA (411bp) protein (137aa)
Ca2+-binding protein, RTX toxin Tax=Caulobacter crescentus OR37 RepID=R0EGR9_CAUCE
Ca2+-binding protein, RTX toxin {ECO:0000313|EMBL:ENZ81194.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
VCBS
PLM4_5_b1_sep16_scaffold_3_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(505..3240)
DNA (2736bp) protein (912aa)
hypothetical protein, partial Tax=Bradyrhizobium japonicum RepID=UPI000381EA64
hypothetical protein
Putative type I secretion system-exported exoprotein {ECO:0000313|EMBL:KGJ69244.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
PLM4_5_b1_sep16_scaffold_3_3
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3542..5452)
DNA (1911bp) protein (637aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003661F55
TRAP transporter, 4TM/12TM fusion protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_3_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5523..6467)
DNA (945bp) protein (315aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037525DF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_3_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6570..7508)
DNA (939bp) protein (313aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0003037DFB
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7505..8269)
DNA (765bp) protein (255aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.20)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWC0_METNO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_3_7
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8284..9249)
DNA (966bp) protein (322aa)
Uncharacterized protein UPF0065 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VMN7_POLNA
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM36915.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
PLM4_5_b1_sep16_scaffold_3_8
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

9487..10812
DNA (1326bp) protein (442aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUQ3_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_5_b1_sep16_scaffold_3_9
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10835..11995
DNA (1161bp) protein (387aa)
Putative uncharacterized protein bin=GWA2_Elusi_like_61_42 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
Tax=GWF2_Sideroxydans_59_14_curated
PLM4_5_b1_sep16_scaffold_3_10
Toxocara canis, Toxocara, Ascaridida, Chromadorea, Nematoda, Metazoa

Not on your lists

12026..13084
DNA (1059bp) protein (353aa)
Uncharacterized protein Tax=Polysphondylium pallidum RepID=D3AZQ8_POLPA
Sialidase {ECO:0000313|EMBL:KHN75860.1}; species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Ascaridida; Ascaridoidea; Toxocaridae; Toxocara.;" source="Toxocara canis (Canine roundworm).;"
amylopullulanase
PLM4_5_b1_sep16_scaffold_3_11
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13127..14851)
DNA (1725bp) protein (575aa)
dehydratase (EC:4.2.1.-)
Dehydratase family protein 5 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HV41_ACHXA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_3_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14887..15855
DNA (969bp) protein (323aa)
Uncharacterized protein Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RNS3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH11049.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
bug50; hypothetical protein
PLM4_5_b1_sep16_scaffold_3_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15866..17170
DNA (1305bp) protein (435aa)
Peptidase M24 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SYC6_PSYIN
peptidase M24
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_3_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17178..17594
DNA (417bp) protein (139aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00036506AA
putative endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17591..18505
DNA (915bp) protein (305aa)
6-phosphogluconate dehydrogenase Tax=Magnetospirillum sp. SO-1 RepID=M2Z1L5_9PROT
6-phosphogluconate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_3_16
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18492..19451
DNA (960bp) protein (320aa)
Tat pathway signal sequence domain protein 15 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HEM3_ACHXA
Tat pathway signal sequence domain-containing protein 15
Tax=GWA2_Curvibacter_64_110_curated
PLM4_5_b1_sep16_scaffold_3_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19438..20088)
DNA (651bp) protein (217aa)
3-oxoadipate CoA-transferase subunit B Tax=Herbaspirillum seropedicae RepID=UPI0002E3D35E
3-oxoadipate CoA-transferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_3_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20085..20765)
DNA (681bp) protein (227aa)
pcaI4; 3-oxoadipate CoA-transferase subunit A (EC:2.8.3.6)
succinyl-CoA:3-ketoacid-CoA transferase Tax=Stenotrophomonas maltophilia RepID=UPI000360C8DF
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_3_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20807..21883
DNA (1077bp) protein (359aa)
Putative malate/L-lactate dehydrogenase Tax=Variovorax paradoxus B4 RepID=T1X5V8_VARPD
putative malate/L-lactate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_3_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22113..22562
DNA (450bp) protein (150aa)
Protein MraZ Tax=Sulfuricella denitrificans skB26 RepID=S6AJ49_9PROT
cell division protein MraZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3_21
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22581..23564
DNA (984bp) protein (328aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI000374AC6C
mraW; S-adenosyl-methyltransferase MraW
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_3_22
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23552..23824
DNA (273bp) protein (91aa)
Cell division protein FtsL Tax=Sulfuricella denitrificans skB26 RepID=S6AN88_9PROT
cell division protein, FtsL -like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23821..25548
DNA (1728bp) protein (576aa)
Cell division protein FtsI Tax=Azoarcus sp. KH32C RepID=H0PSX4_9RHOO
ftsI; cell division protein FtsI
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3_24
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25590..27014
DNA (1425bp) protein (475aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y633_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3_25
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27011..28363
DNA (1353bp) protein (451aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Burkholderia thailandensis RepID=UPI00016A5800
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_3_26
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28363..29454
DNA (1092bp) protein (364aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000361E429
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_3_27
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29457..30842
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP25_SIDLE
UDP-N-acetylmuramoylalanine/D-glutamate ligase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3_28
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30839..32002
DNA (1164bp) protein (388aa)
Lipid II flippase FtsW Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMH4_THIDA
cell division protein FtsW
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3_29
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31999..33051
DNA (1053bp) protein (351aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase Tax=Azoarcus toluclasticus RepID=UPI00037E3B33
murG; N-acetylglucosaminyl transferase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_3_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33048..34424
DNA (1377bp) protein (459aa)
murC; UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--alanine ligase Tax=Pandoraea sp. RB-44 RepID=V5UEK6_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying items 1-30 of 135 in total

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