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PLM4_5_b1_sep16_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_27_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4..456)
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDN3_9RHOB
Gfa-like protein
Tax=RBG_16_Gamma2_60_9_curated
PLM4_5_b1_sep16_scaffold_27_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

531..1973
DNA (1443bp) protein (481aa)
Putative uncharacterized protein Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YE04_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_27_3
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2000..2611)
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ML1_CUPPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ65616.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
PLM4_5_b1_sep16_scaffold_27_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2611..3684)
DNA (1074bp) protein (358aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA160-J14 RepID=UPI00035E4056
Uncharacterized protein {ECO:0000313|EMBL:KGH27153.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
4-hydroxyphenylacetate 3-hydroxylase
PLM4_5_b1_sep16_scaffold_27_5
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3973..4368)
DNA (396bp) protein (132aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00035E76E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ65615.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
PLM4_5_b1_sep16_scaffold_27_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4460..5080
DNA (621bp) protein (207aa)
Glutathione S-transferase Tax=Polaromonas sp. CF318 RepID=J2KQR6_9BURK
glutathione S-transferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_27_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5117..5800)
DNA (684bp) protein (228aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI00037FABC1
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_27_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5867..7402)
DNA (1536bp) protein (512aa)
Acetyl-CoA synthetase family protein Tax=Oceanibaculum indicum P24 RepID=K2JPZ5_9PROT
Acetyl-CoA synthetase family protein {ECO:0000313|EMBL:EKE76577.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
AMP-dependent synthetase
PLM4_5_b1_sep16_scaffold_27_9
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7399..8559)
DNA (1161bp) protein (387aa)
Iron-containing alcohol dehydrogenase Tax=Halomonas sp. HAL1 RepID=G4F4S2_9GAMM
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EHA16383.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
alcohol dehydrogenase
PLM4_5_b1_sep16_scaffold_27_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8579..8839
DNA (261bp) protein (87aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_27_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8836..9279)
DNA (444bp) protein (148aa)
MarR family transcriptional regulator Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UG12_MYXSD
MarR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_27_12
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9352..10104
DNA (753bp) protein (251aa)
Short-chain dehydrogenase Tax=Oceanibaculum indicum P24 RepID=K2JMB8_9PROT
Short-chain dehydrogenase {ECO:0000313|EMBL:EKE75547.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
short-chain dehydrogenase
PLM4_5_b1_sep16_scaffold_27_13
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10258..10719
DNA (462bp) protein (154aa)
iorA2; oxidoreductase (EC:1.3.99.16)
Probable oxidoreductase {ECO:0000313|EMBL:CAP44474.1}; EC=1.3.99.16 {ECO:0000313|EMBL:CAP44474.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Probable oxidoreductase Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9K2_BORPD
PLM4_5_b1_sep16_scaffold_27_14
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10722..12839
DNA (2118bp) protein (706aa)
Isoquinoline 1-oxidoreductase beta subunit (EC:1.3.99.16)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=Polaromonas sp. CF318 RepID=J2KZU3_9BURK
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:EJL85545.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
PLM4_5_b1_sep16_scaffold_27_15
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12850..13632
DNA (783bp) protein (261aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI000365A0C5
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
PLM4_5_b1_sep16_scaffold_27_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13601..14338)
DNA (738bp) protein (246aa)
Silent information regulator protein Sir2 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Silent information regulator protein Sir2
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_27_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14476..15288
DNA (813bp) protein (271aa)
Aldo/keto reductase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ADD1_THECD
oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_27_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15301..16938
DNA (1638bp) protein (546aa)
Tannase and feruloyl esterase Tax=Variovorax paradoxus (strain EPS) RepID=E6V8R3_VARPE
tannase and feruloyl esterase
Tannase and feruloyl esterase {ECO:0000313|EMBL:ADU36135.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
PLM4_5_b1_sep16_scaffold_27_19
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16987..18024
DNA (1038bp) protein (346aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component Tax=Acidovorax sp. CF316 RepID=J1EE65_9BURK
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:KDB51076.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
TRAP dicarboxylate transporter subunit DctP
PLM4_5_b1_sep16_scaffold_27_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18075..18542
DNA (468bp) protein (156aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00035CCFE9
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_27_21
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18539..19861
DNA (1323bp) protein (441aa)
C4-dicarboxylate ABC transporter permease Tax=Caldimonas manganoxidans RepID=UPI000369521E
dctQ; large permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_27_22
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20089..21177
DNA (1089bp) protein (363aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Thauera RepID=C4ZJY7_THASP
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_27_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21272..22390
DNA (1119bp) protein (373aa)
Leu/Ile/Val-binding protein Tax=Herbaspirillum frisingense GSF30 RepID=R0GA23_9BURK
extracellular ligand-binding receptor
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_5_b1_sep16_scaffold_27_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

22574..23293
DNA (720bp) protein (240aa)
putative High-affinity branched-chain amino acid transport system permease protein bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter permease
Tax=CSP1_6_Rokubacteria
PLM4_5_b1_sep16_scaffold_27_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

23301..24188
DNA (888bp) protein (296aa)
putative ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); branched-chain amino acid transport protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter permease
Tax=CSP1_6_Rokubacteria
PLM4_5_b1_sep16_scaffold_27_26
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24178..24972
DNA (795bp) protein (265aa)
Putative ABC tranpsorter Tax=Nitratireductor indicus C115 RepID=K2P7G8_9RHIZ
ABC transporter
Tax=RBG_13_Deltaproteobacteria_51_10_curated
PLM4_5_b1_sep16_scaffold_27_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

24975..25688
DNA (714bp) protein (238aa)
livF2; high-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
Tax=CSP1_6_Rokubacteria
PLM4_5_b1_sep16_scaffold_27_28
unknown

Not on your lists

comp(25690..26046)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_27_29
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26191..27147)
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9W6R7_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ04222.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
putative Bug-like extracytoplasmic solute binding receptor,TTT family
PLM4_5_b1_sep16_scaffold_27_30
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27273..30011)
DNA (2739bp) protein (913aa)
Two-component system, unclassified family, sensor histidine kinase and response regulator Tax=Glaciecola arctica BSs20135 RepID=K6YLD7_9ALTE
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Displaying items 1-30 of 87 in total

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