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PLM4_5_b1_sep16_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_50_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..179
DNA (177bp) protein (59aa)
Putative transmembrane protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCM3_NITMU
putative transmembrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_50_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176..763
DNA (588bp) protein (196aa)
Putative electron transport protein SCO1/SenC Tax=Herminiimonas arsenicoxydans RepID=A4G935_HERAR
SCO1/Sen family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..1666)
DNA (900bp) protein (300aa)
RNA polymerase sigma factor RpoH Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y487_9RHOO
alternative sigma factor RpoH
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1772..2656)
DNA (885bp) protein (295aa)
Cell division protein FtsX Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y4M8_9RHOO
cell division protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2653..3306)
DNA (654bp) protein (218aa)
Putative ATPase involved in cell division Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJK1_AZOSU
putative ATPase involved in cell division
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_50_6
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3299..4216)
DNA (918bp) protein (306aa)
cell division protein FtsY Tax=Methyloversatilis sp. NVD RepID=UPI0003787AD8
ftsY; signal recognition particle-docking protein FtsY
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_50_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4223..4816
DNA (594bp) protein (198aa)
Methyltransferase Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFD1_NITSI
methyltransferase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_50_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4785..5276
DNA (492bp) protein (164aa)
phosphopantetheine adenylyltransferase Tax=Burkholderia sp. JPY347 RepID=UPI00037432EF
phosphopantetheine adenylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5283..6092)
DNA (810bp) protein (270aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase Tax=Thauera sp. 63 RepID=N6X991_9RHOO
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_50_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6144..7883
DNA (1740bp) protein (580aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AB05_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_50_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7893..8423
DNA (531bp) protein (177aa)
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
outer-membrane lipoprotein lolB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_12
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8420..9247
DNA (828bp) protein (276aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ISPE_NITMU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_50_trna_1
unknown

Not on your lists

9253..9326
DNA (74bp)
transferRNA Gln
PLM4_5_b1_sep16_scaffold_50_13
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9398..10321
DNA (924bp) protein (308aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Tax=Sulfuricella denitrificans skB26 RepID=S6B7L0_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_50_14
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10384..11136
DNA (753bp) protein (251aa)
50S ribosomal protein L25 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GDH2_NITSI
50S ribosomal protein L25
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_50_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11224..11868
DNA (645bp) protein (215aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
peptidyl-tRNA hydrolase Tax=Comamonas sp. B-9 RepID=UPI0003956FE7
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11865..12959
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF Tax=Burkholderia RepID=I5CYF7_9BURK
GTP-dependent nucleic acid-binding protein EngD
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_50_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12956..13405
DNA (450bp) protein (150aa)
GCN5-related N-acetyltransferase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPX4_SIDLE
GCN5-related N-acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_18
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13439..14923)
DNA (1485bp) protein (495aa)
Succinate-semialdehyde dehydrogenase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPJ5_AZOSU
succinate-semialdehyde dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_50_19
unknown

Not on your lists

15111..15470
DNA (360bp) protein (120aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_50_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15570..16349)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI000313620F
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_21
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16355..17251)
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHF2_AZOL4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_50_22
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17248..18729)
DNA (1482bp) protein (494aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFF9_METPP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_50_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18746..19474
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein RALTA_A0859 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=Y859_CUPTR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_50_24
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19471..19986
DNA (516bp) protein (172aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_50_25
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19983..20546
DNA (564bp) protein (188aa)
ruvA; Holliday junction DNA helicase RuvA (EC:3.6.1.-)
Holliday junction DNA helicase RuvA Tax=Burkholderia kururiensis RepID=UPI000348DA8B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_26
unknown

Not on your lists

comp(20548..21105)
DNA (558bp) protein (186aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_50_27
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21175..22221
DNA (1047bp) protein (349aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Ralstonia sp. PBA RepID=I9W483_9RALS
ATP-dependent DNA helicase RuvB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_50_28
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22287..22655
DNA (369bp) protein (123aa)
Tol-pal system-associated acyl-CoA thioesterase Tax=Thauera phenylacetica B4P RepID=N6ZN69_9RHOO
ybgC; tol-pal system-associated acyl-CoA thioesterase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_50_29
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22660..23343
DNA (684bp) protein (228aa)
Protein TolQ Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPG3_ACCPU
protein tolQ
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Displaying items 1-30 of 142 in total

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