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PLM4_5_b1_sep16_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_54_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..1449)
DNA (1200bp) protein (400aa)
outer membrane protein (porin) bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_54_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1642..2436)
DNA (795bp) protein (265aa)
trpC; indole-3-glycerol phosphate synthase (IGPS) (EC:4.1.1.48)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI00036233B3
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_54_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2441..3481)
DNA (1041bp) protein (347aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVD4_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_54_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3478..4050)
DNA (573bp) protein (191aa)
Anthranilate synthase component II Tax=Pseudomonas sp. HPB0071 RepID=N2J9W1_9PSED
glutamine amidotransferase of anthranilate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_54_5
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4047..5537)
DNA (1491bp) protein (497aa)
Anthranilate synthase component I Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMQ9_AZOSU
anthranilate synthase component I
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_54_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5702..6361)
DNA (660bp) protein (220aa)
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-5-phosphate 3-epimerase Tax=mine drainage metagenome RepID=T1D689_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_54_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6387..6770
DNA (384bp) protein (128aa)
Protein ApaG Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMR2_AZOSU
Mg2+/Co2+ transport protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_54_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6781..9204
DNA (2424bp) protein (808aa)
TPR repeat-containing protein Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SDU9_PELPB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_54_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9201..10391
DNA (1191bp) protein (397aa)
MltA domain protein Tax=Thauera sp. (strain MZ1T) RepID=C4KBT0_THASP
MltA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_54_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10402..11142)
DNA (741bp) protein (247aa)
Thiol:disulphide interchange protein Tax=Sulfuricella denitrificans skB26 RepID=S6AJ82_9PROT
thiol:disulphide interchange protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_54_11
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11142..12329)
DNA (1188bp) protein (396aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y688_NITMU
ubiquinone biosynthesis hydroxylase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_54_trna_1
unknown

Not on your lists

12334..12407
DNA (74bp)
transferRNA Met
PLM4_5_b1_sep16_scaffold_54_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12426..12722
DNA (297bp) protein (99aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5RCU6_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_54_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12735..14063
DNA (1329bp) protein (443aa)
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
(dimethylallyl)adenosine tRNA methylthiotransferase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_54_14
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14053..15015
DNA (963bp) protein (321aa)
PhoH family protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRT7_ACCPU
PhoH family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_54_15
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14975..15424
DNA (450bp) protein (150aa)
Endoribonuclease YbeY Tax=Aromatoleum aromaticum (strain EbN1) RepID=YBEY_AROAE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_54_16
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15435..16256
DNA (822bp) protein (274aa)
CBS domain containing protein Tax=Thauera RepID=C4ZLM3_THASP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_54_17
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16253..17716
DNA (1464bp) protein (488aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
apolipoprotein N-acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_54_18
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17730..18602
DNA (873bp) protein (291aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKN2_ACCPU
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_54_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18606..20678
DNA (2073bp) protein (691aa)
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit Tax=Thauera RepID=C4ZLM6_THASP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_54_20
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20675..21208
DNA (534bp) protein (178aa)
D,D-heptose 1,7-bisphosphate phosphatase Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SI14_GALCS
histidinol-phosphate phosphatase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_54_21
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21205..21906
DNA (702bp) protein (234aa)
Phospholipid/glycerol acyltransferase Tax=Methylovorus RepID=C6X7A6_METSD
phospholipid/glycerol acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_54_22
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21934..22311
DNA (378bp) protein (126aa)
Lactoylglutathione lyase Tax=Pasteurella bettyae CCUG 2042 RepID=I3DHG2_9PAST
glyoxalase I
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_54_23
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22568..23404
DNA (837bp) protein (279aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00035EF1FE
carboxyvinyl-carboxyphosphonate phosphorylmutase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_5_b1_sep16_scaffold_54_24
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23520..23639
DNA (120bp) protein (40aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YE61_9DELT
hypothetical protein
Tax=CG_Desulfob_01
PLM4_5_b1_sep16_scaffold_54_25
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23629..23877
DNA (249bp) protein (83aa)
Putative uncharacterized protein bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_54_26
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23882..24634)
DNA (753bp) protein (251aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.57 2.1.1.62 2.1.1.-)
Ribosomal RNA small subunit methyltransferase A Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=RSMA_CHRVO
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_54_27
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24606..25505)
DNA (900bp) protein (300aa)
4-hydroxythreonine-4-phosphate dehydrogenase Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=PDXA_CHRVO
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_54_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25502..26785)
DNA (1284bp) protein (428aa)
Chaperone SurA Tax=Sulfuricella denitrificans skB26 RepID=S6B7E4_9PROT
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_54_29
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26785..28989)
DNA (2205bp) protein (735aa)
LPS-assembly protein LptD Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPR7_AZOSU
organic solvent tolerance protein OstA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying items 1-30 of 62 in total

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