ggKbase home page

PLM4_5_b1_sep16_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_110_1
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..334)
DNA (333bp) protein (111aa)
Glutathione S-transferase Tax=Pseudomonas fluorescens Q2-87 RepID=J2Y695_PSEFL
glutathione S-transferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_110_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..2023)
DNA (1593bp) protein (531aa)
Gamma-glutamyltransferase Tax=Mycobacterium smegmatis JS623 RepID=L0IQD3_MYCSM
gamma-glutamyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_110_3
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2020..3087)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Burkholderia bryophila RepID=UPI000375601C
zinc-binding dehydrogenase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_110_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3084..3881)
DNA (798bp) protein (266aa)
OAH/OAS sulfhydrylase Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y334_9RHOO
OAH/OAS sulfhydrylase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_110_5
Streptomyces eurythermus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4356..5114)
DNA (759bp) protein (253aa)
O-methyltransferase Tax=Streptomyces eurythermus RepID=A8CAB4_9ACTO
O-methyltransferase {ECO:0000313|EMBL:ABV49599.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces eurythermus.;"
macrocin-O-methyltransferase
PLM4_5_b1_sep16_scaffold_110_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5140..6132)
DNA (993bp) protein (331aa)
NADP-dependent aryl-alcohol dehydrogenase Tax=Burkholderia sp. JPY347 RepID=UPI000362C28E
NADP-dependent aryl-alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_110_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6142..6939)
DNA (798bp) protein (266aa)
Amino acid ABC transporter substrate-binding protein Tax=Cupriavidus basilensis OR16 RepID=H1S1Z2_9BURK
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EHP43486.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
amino acid ABC transporter substrate-binding protein
PLM4_5_b1_sep16_scaffold_110_8
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6929..7432)
DNA (504bp) protein (168aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000370692E
Appr-1-p processing domain-containing protein
Tax=GWD2_Desulfuromonadales_61_12_curated
PLM4_5_b1_sep16_scaffold_110_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7464..8345)
DNA (882bp) protein (294aa)
Helix-turn-helix domain-containing protein Tax=Burkholderia sp. YI23 RepID=G8M9K6_9BURK
helix-turn-helix domain-containing protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_110_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8434..8904)
DNA (471bp) protein (157aa)
Putative CoA-binding protein Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z1A3_9RHOO
putative CoA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_110_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8945..9286
DNA (342bp) protein (114aa)
hypothetical protein Tax=Herbaspirillum lusitanum RepID=UPI0002D9AEB6
NIPSNAP family containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_110_12
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9283..10224
DNA (942bp) protein (314aa)
Alpha/beta hydrolase fold-containing protein Tax=Variovorax paradoxus B4 RepID=T1XI12_VARPD
alpha/beta hydrolase fold-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_110_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10203..10829
DNA (627bp) protein (209aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CR51_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_110_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10842..12524
DNA (1683bp) protein (561aa)
Putative acetolactate synthase II large subunit Tax=Rhizobium sp. (strain NGR234) RepID=C3KNW1_RHISN
thiamine pyrophosphate protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_110_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12604..12999)
DNA (396bp) protein (132aa)
Putative uncharacterized protein Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TGL5_PARBH
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_110_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13109..13621
DNA (513bp) protein (171aa)
RNA polymerase sigma factor Tax=Arenimonas oryziterrae RepID=UPI0003B4EFFF
RNA polymerase subunit sigma-24
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_110_17
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13614..14219
DNA (606bp) protein (202aa)
Uncharacterized protein Tax=Pseudomonas chlororaphis subsp. aureofaciens 30-84 RepID=J2EVL3_9PSED
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_110_18
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14216..17176)
DNA (2961bp) protein (987aa)
Spermine synthase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H945_ANADF
spermine synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_110_19
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17182..18027)
DNA (846bp) protein (282aa)
3-hydroxyisobutyrate dehydrogenase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGL3_THET1
6-phosphogluconate dehydrogenase NAD-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_110_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18071..18799)
DNA (729bp) protein (243aa)
arginine ABC transporter ATP-binding protein Tax=Chitiniphilus shinanonensis RepID=UPI0003708853
artP; arginine transporter ATP-binding subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_110_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18810..19502)
DNA (693bp) protein (231aa)
Glutamate Aspartate transport system permease protein gltK Tax=Collimonas fungivorans (strain Ter331) RepID=G0AF75_COLFT
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_110_22
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19506..20261)
DNA (756bp) protein (252aa)
Glutamate Aspartate transport system permease protein gltJ Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZ17_9BURK
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_110_23
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20332..21234)
DNA (903bp) protein (301aa)
Extracellular solute-binding protein family 3 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBU1_METNO
family 3 extracellular solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_110_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21333..26015
DNA (4683bp) protein (1561aa)
NAD-glutamate dehydrogenase Tax=Azoarcus sp. KH32C RepID=H0PRK4_9RHOO
gdh; NAD-glutamate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_110_25
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26113..28065
DNA (1953bp) protein (651aa)
Acetoacetyl-CoA synthase Tax=Thauera sp. (strain MZ1T) RepID=C4ZJN1_THASP
acetoacetyl-CoA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_110_26
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28074..28745
DNA (672bp) protein (224aa)
glutathione S-transferase Tax=Janthinobacterium sp. CG3 RepID=UPI0003492F5E
glutathione S-transferase, C-terminal domain protein
Glutathione S-transferase, C-terminal domain protein {ECO:0000313|EMBL:CDG81019.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
PLM4_5_b1_sep16_scaffold_110_27
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28759..29727)
DNA (969bp) protein (323aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00037DD4A0
LPPG domain-containing protein containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM4_5_b1_sep16_scaffold_110_28
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29769..30434)
DNA (666bp) protein (222aa)
phospholipase/carboxylesterase family protein (EC:3.1.-.-)
Phospholipase/carboxylesterase family protein Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HK41_ACHXA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_110_29
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30521..32209
DNA (1689bp) protein (563aa)
ABC transporter domain-containing protein Tax=Desulfovibrio sp. X2 RepID=S7U4A5_9DELT
ATP-binding cassette transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_110_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32196..32678)
DNA (483bp) protein (161aa)
Thioesterase superfamily protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THZ5_9CHLR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying items 1-30 of 51 in total

View Taxonomy