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PLM4_5_b1_sep16_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_111_1
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1059..2165
DNA (1107bp) protein (369aa)
Lipopolysaccharide heptosyltransferase III Tax=Ralstonia sp. PBA RepID=I9KT59_9RALS
Lipopolysaccharide heptosyltransferase III {ECO:0000313|EMBL:EIZ03415.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
glycosyltransferase 9 family protein
PLM4_5_b1_sep16_scaffold_111_2
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2251..2571
DNA (321bp) protein (107aa)
Lipoprotein Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1F8_9GAMM
Lipoprotein {ECO:0000313|EMBL:EHQ51541.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_111_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2632..3336
DNA (705bp) protein (235aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKJ8_THIDA
SOS cell division inhibitor SulA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_111_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3275..4627
DNA (1353bp) protein (451aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEZ7_THIDA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_111_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4611..7643
DNA (3033bp) protein (1011aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
Error-prone DNA polymerase Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEZ8_THIDA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_111_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7718..8023
DNA (306bp) protein (102aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LXZ5_SYNAS
cytoplasmic protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_111_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8016..9164
DNA (1149bp) protein (383aa)
Signal transduction histidine kinase Tax=Beggiatoa alba B18LD RepID=I3CDF2_9GAMM
signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_111_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9161..10393
DNA (1233bp) protein (411aa)
Serine/threonine protein kinase Tax=gamma proteobacterium HTCC5015 RepID=B5JV56_9GAMM
PpkA-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_111_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10419..10808)
DNA (390bp) protein (130aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003634F60
Response regulator receiver domain-containing protein (CheY-like)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_111_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10816..12627)
DNA (1812bp) protein (604aa)
PAS/PAC sensor hybrid histidine kinase Tax=Azoarcus sp. KH32C RepID=H0PTE3_9RHOO
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_111_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12695..13330)
DNA (636bp) protein (212aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_111_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13409..14266
DNA (858bp) protein (286aa)
Beta-aspartyl-peptidase Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U8J6_OCEP5
beta-aspartyl-peptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_111_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14263..15444
DNA (1182bp) protein (394aa)
pncB; nicotinate phosphoribosyltransferase (EC:6.3.4.21)
Nicotinate phosphoribosyltransferase Tax=Bordetella avium (strain 197N) RepID=Q2KUN2_BORA1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_111_14
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15485..18712
DNA (3228bp) protein (1076aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
membrane protein-like protein
Tax=CG_Delta_02
PLM4_5_b1_sep16_scaffold_111_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18773..19432
DNA (660bp) protein (220aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI00036E5AA1
uncharacterized protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PLM4_5_b1_sep16_scaffold_111_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19450..20589)
DNA (1140bp) protein (380aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000373C26B
acetyl-CoA hydrolase/transferase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_111_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20625..21215
DNA (591bp) protein (197aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase WQE_07492 Tax=Burkholderia terrae BS001 RepID=I5D0G5_9BURK
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_111_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21249..21797)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Janthinobacterium sp. HH01 RepID=L9PRV9_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_111_19
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21933..22760)
DNA (828bp) protein (276aa)
Phenazine biosynthesis PhzC/PhzF-like protein Tax=Achromobacter arsenitoxydans SY8 RepID=H0F4S4_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_111_20
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22757..23137)
DNA (381bp) protein (127aa)
ytkA-like family protein
hypothetical protein BuboB_22101 bin=GWC2_Methylomirabilis_70_16 species=Burkholderia ubonensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_111_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23113..24000)
DNA (888bp) protein (296aa)
Inner-membrane translocator bin=GWC2_Methylomirabilis_70_16 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid transport system / permease component family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_111_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23973..24842)
DNA (870bp) protein (290aa)
Branched-chain amino acid ABC-type transport system, permease bin=GWC2_Methylomirabilis_70_16 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid transport system / permease component family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_111_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24839..25558)
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC-type branched-chain amino acid transport systems, ATPase component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_111_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(25555..26304)
DNA (750bp) protein (250aa)
sulfate-transporting ATPase (EC:3.6.3.25)
HmgG bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_5_b1_sep16_scaffold_111_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26297..27163)
DNA (867bp) protein (289aa)
Branched-chain amino acid ABC transporter, permease protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid transport system / permease component family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_111_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27167..28045)
DNA (879bp) protein (293aa)
Branched-chain amino acid ABC-type transport system, permease components bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LivH; branched-chain amino acid ABC-type transport system, permease components
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_111_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(28100..29272)
DNA (1173bp) protein (391aa)
putative ABC-transport systems periplasmic component precursor bin=GWC2_Methylomirabilis_70_16 species=Burkholderia ubonensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
periplasmic binding domain protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_5_b1_sep16_scaffold_111_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29329..30990
DNA (1662bp) protein (554aa)
Acyl-CoA synthetase Tax=Oceanibaculum indicum P24 RepID=K2JNP2_9PROT
acyl-CoA synthetase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_111_29
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30987..31574
DNA (588bp) protein (196aa)
Genome sequencing data, contig C312 Tax=Microcystis aeruginosa RepID=A8YH48_MICAE
type 11 methyltransferase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
PLM4_5_b1_sep16_scaffold_111_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31571..32515)
DNA (945bp) protein (315aa)
Cation efflux family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6L2_CALAS
cation efflux family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying items 1-30 of 44 in total

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