name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM4_5_b1_sep16_scaffold_170_1
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1094)
|
Uncharacterized protein Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LUI3_DINSH
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
|
|
PLM4_5_b1_sep16_scaffold_170_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1165..1866)
|
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon Tax=Herbaspirillum sp. JC206 RepID=UPI0002E4FD5A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
|
|
PLM4_5_b1_sep16_scaffold_170_3
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1853..2293)
|
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H Tax=Ralstonia sp. PBA RepID=I9W5D3_9RALS
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2286..2969)
|
methyltransferase type 11 Tax=Azoarcus toluclasticus RepID=UPI000370BB6B
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3064..3828
|
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase Tax=Sulfuricella denitrificans skB26 RepID=S6AK75_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3866..5380
|
LysM repeat-containing protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QQ29_AZOSU
LysM repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5402..7192)
|
peptide ABC transporter ATPase (EC:3.6.3.24 3.6.3.31)
Peptide ABC transporter ATPase Tax=Sulfuricella denitrificans skB26 RepID=S6B2U6_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7189..8541)
|
Binding-protein-dependent transport systems inner membrane component Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6J8_NITMU
binding-protein dependent transport system inner membrane protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8543..9520)
|
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) Tax=Nitrosospira sp. APG3 RepID=M5DL17_9PROT
binding-protein dependent transport system inner membrane protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9517..11589)
|
ABC-type dipeptide transport system, periplasmic component Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJU3_AZOSU
dipeptide ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11613..12410
|
Enoyl-ACP reductase Tax=Cupriavidus sp. HPC(L) RepID=V2J721_9BURK
enoyl-(acyl carrier protein) reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12407..13372
|
protein bugT bin=bin7_NC10_sister species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
bug43; hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_13
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13373..15235)
|
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EQ2_DECAR
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
|
|
PLM4_5_b1_sep16_scaffold_170_trna_3
unknown
|
Not on your lists |
comp(15251..15324)
|
transferRNA Asp
|
|
PLM4_5_b1_sep16_scaffold_170_trna_2
unknown
|
Not on your lists |
comp(15342..15414)
|
transferRNA Val
|
|
PLM4_5_b1_sep16_scaffold_170_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15448..15705)
|
Bacterial nucleoid DNA-binding protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJU0_AZOSU
nucleoid DNA-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15731..18160)
|
ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6J2_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_16
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18249..19520)
|
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJT8_AZOSU
endopeptidase Clp ATP-binding regulatory subunit ClpX
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
|
|
PLM4_5_b1_sep16_scaffold_170_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19521..20150)
|
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
Clp protease proteolytic subunit ClpP Tax=Thiobacillus denitrificans RepID=UPI00037455E4
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
PLM4_5_b1_sep16_scaffold_170_18
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20147..21451)
|
Trigger factor Tax=Azoarcus sp. KH32C RepID=H0PV94_9RHOO
tig; trigger factor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_trna_1
unknown
|
Not on your lists |
comp(21482..21563)
|
transferRNA Leu
|
|
PLM4_5_b1_sep16_scaffold_170_19
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21602..22405
|
phytoene synthase Tax=Azoarcus toluclasticus RepID=UPI00036FAE0D
terpenoid synthase-related protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
|
|
PLM4_5_b1_sep16_scaffold_170_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22402..23235
|
hpnD; squalene synthase HpnD (EC:2.5.1.21)
phytoene synthase Tax=Massilia niastensis RepID=UPI000375990C
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_21
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23220..24446
|
Phytoene desaturase, pro-zeta-carotene producing Tax=Collimonas fungivorans (strain Ter331) RepID=G0AH31_COLFT
phytoene desaturase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
PLM4_5_b1_sep16_scaffold_170_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24460..25281
|
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YZ5_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
PLM4_5_b1_sep16_scaffold_170_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25307..26653)
|
DNA repair protein RadA Tax=Uliginosibacterium gangwonense RepID=UPI00035C4216
DNA repair protein RadA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
PLM4_5_b1_sep16_scaffold_170_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26653..27723)
|
alanine racemase (EC:5.1.1.1)
Alanine racemase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSN4_ACCPU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
PLM4_5_b1_sep16_scaffold_170_25
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27770..29047
|
Major facilitator superfamily MFS_1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKH8_RUBGI
major facilitator superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
|
|
PLM4_5_b1_sep16_scaffold_170_26
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29150..29701)
|
Phage SPO1 DNA polymerase-related protein bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
DNA polymerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
|
|
PLM4_5_b1_sep16_scaffold_170_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29827..30288)
|
alanine acetyltransferase Tax=Methylotenera RepID=UPI00036FFA5F
ribosomal-protein-alanine acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|