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PLM4_5_b1_sep16_scaffold_311

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_311_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..228
DNA (228bp) protein (76aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI00037EC61B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_311_2
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225..1508)
DNA (1284bp) protein (428aa)
Uncharacterized protein Tax=Pandoraea sp. SD6-2 RepID=R7X039_9BURK
degP; periplasmic protease; contains two pdz domain
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_5_b1_sep16_scaffold_311_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1558..2412)
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UII0_MYXSD
hypothetical protein
Hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:AKF08698.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
PLM4_5_b1_sep16_scaffold_311_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2409..2819)
DNA (411bp) protein (137aa)
acyl-CoA hydrolase (EC:3.1.2.-)
Acyl-CoA hydrolase Tax=Herbaspirillum frisingense GSF30 RepID=R0G8Q7_9BURK
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_311_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2819..4771)
DNA (1953bp) protein (651aa)
Alpha-subunit of fatty acid oxidation complex Tax=Azoarcus sp. KH32C RepID=H0PWP6_9RHOO
fadB; alpha-subunit of fatty acid oxidation complex
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4774..6066)
DNA (1293bp) protein (431aa)
Acetyl-CoA C-acetyltransferase Tax=Azoarcus sp. KH32C RepID=H0PWP7_9RHOO
fadA; acetyl-CoA C-acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_311_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6063..8216)
DNA (2154bp) protein (718aa)
Acyl-coenzyme A dehydrogenase Tax=Methyloversatilis universalis FAM5 RepID=F5RDE4_9RHOO
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8243..8926)
DNA (684bp) protein (228aa)
TetR family transcriptional regulator Tax=Azoarcus toluclasticus RepID=UPI00036621FF
reg1; TetR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_311_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8999..10822
DNA (1824bp) protein (608aa)
ABC transporter related protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB82_NITMU
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10998..11894
DNA (897bp) protein (299aa)
D-alanyl-D-alanine carboxypeptidase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM35_AZOSU
D-alanyl-D-alanine carboxypeptidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11948..12850
DNA (903bp) protein (301aa)
Methyltransferase Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K531_NITWC
methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_311_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13028..13819)
DNA (792bp) protein (264aa)
IclR family transcriptional regulator Tax=Azoarcus toluclasticus RepID=UPI000378FAD4
IclR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_311_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13873..15018
DNA (1146bp) protein (382aa)
L-lactate dehydrogenase (EC:1.1.2.3)
L-lactate dehydrogenase Tax=Collimonas fungivorans (strain Ter331) RepID=G0AH32_COLFT
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_311_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14975..16846)
DNA (1872bp) protein (624aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=MNMC_BURPP
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16896..18401
DNA (1506bp) protein (502aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase (Acylating) Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IK33_ANADE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_311_16
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18404..19237
DNA (834bp) protein (278aa)
hypothetical protein Tax=Ralstonia solanacearum RepID=UPI0002DA731B
conserved hypothethical protein, AttM-like protein
Conserved hypothethical protein, AttM-like protein {ECO:0000313|EMBL:CBJ40194.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
PLM4_5_b1_sep16_scaffold_311_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19234..20094
DNA (861bp) protein (287aa)
immunogenic protein precursor Tax=Bradyrhizobium japonicum RepID=UPI00036B01EC
immunogenic protein precursor
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_311_18
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20104..20973)
DNA (870bp) protein (290aa)
UPI0003CF8430 related cluster Tax=unknown RepID=UPI0003CF8430
IclR family transcriptional regulator {ECO:0000313|EMBL:KGD88064.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
IclR family transcriptional regulator
PLM4_5_b1_sep16_scaffold_311_19
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21009..21980
DNA (972bp) protein (324aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI000307C543
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJN13530.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
serA; phosphoglycerate dehydrogenase
PLM4_5_b1_sep16_scaffold_311_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21977..23047
DNA (1071bp) protein (357aa)
Uncharacterized protein Tax=Advenella kashmirensis W13003 RepID=V8R090_9BURK
putative mandelate racemase/muconate lactonizing enzyme family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_21
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23339..25300
DNA (1962bp) protein (654aa)
parE; DNA topoisomerase IV subunit B (EC:5.99.1.-)
DNA topoisomerase 4 subunit B Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NZ09_CHRVO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_22
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25293..25514
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25517..27811
DNA (2295bp) protein (765aa)
DNA topoisomerase 4 subunit A Tax=Burkholderia glumae (strain BGR1) RepID=C5AB89_BURGB
DNA topoisomerase IV subunit A
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_24
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27801..29018
DNA (1218bp) protein (406aa)
Diguanylate cyclase bin=GWC2_Syntrophus__56_31 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
diguanylate cyclase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_311_25
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29015..29785
DNA (771bp) protein (257aa)
Trans-aconitate 2-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147}; EC=2.1.1.144 {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147};; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Trans-aconitate 2-methyltransferase Tax=alpha proteobacterium BAL199 RepID=A8TT06_9PROT
tam; trans-aconitate methyltransferase
PLM4_5_b1_sep16_scaffold_311_26
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29787..30323
DNA (537bp) protein (179aa)
LemA family protein bin=GWF1_Xanthomonadales_69_6 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
putative LemA family protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_311_27
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30320..32008
DNA (1689bp) protein (563aa)
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Predicted membrane protein (DUF2207)
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_311_28
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32047..32316
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 Tax=Azoarcus sp. KH32C RepID=H0PTG2_9RHOO
infA; translation initiation factor IF-1
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_311_29
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32320..32730
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Cupriavidus sp. HPC(L) RepID=V2IYK1_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_311_30
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32826..33386
DNA (561bp) protein (187aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003813E84
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying items 1-30 of 68 in total

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