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PLM4_5_b1_sep16_scaffold_314

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_314_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..169)
DNA (168bp) protein (56aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS43_ALIDB
CDP-diacylglycerol/serine O-phosphatidyltransferase
CDP-diacylglycerol/serine O-phosphatidyltransferase {ECO:0000313|EMBL:AEB82526.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
PLM4_5_b1_sep16_scaffold_314_2
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(407..1327)
DNA (921bp) protein (307aa)
Putative uncharacterized protein Tax=Alistipes indistinctus YIT 12060 RepID=G5HB67_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_314_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1296..2327)
DNA (1032bp) protein (344aa)
Epoxyqueuosine reductase Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIQ2_THIDA
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_314_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2733..3968
DNA (1236bp) protein (412aa)
Conserved hypothetical N-acetylmuramoyl-L-alanine amidase Tax=Azoarcus sp. (strain BH72) RepID=A1K4V5_AZOSB
N-acetylmuramoyl-L-alanine amidase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_314_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3965..4606)
DNA (642bp) protein (214aa)
membrane protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037B585A
dedA; DedA protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_314_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4631..6328
DNA (1698bp) protein (566aa)
DNA mismatch repair protein MutL Tax=Methyloversatilis universalis FAM5 RepID=F5RE32_9RHOO
DNA mismatch repair protein MutL
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_314_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6349..7080
DNA (732bp) protein (244aa)
oxidoreductase Tax=Halomonas sp. KM-1 RepID=UPI000289FBA0
Short chain dehydrogenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_314_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7092..7994
DNA (903bp) protein (301aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002D9ED78
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_314_9
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8129..9598
DNA (1470bp) protein (490aa)
Uncharacterized protein (Fragment) Tax=Pseudomonas mosselii SJ10 RepID=V6UTJ0_9PSED
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AIN61395.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
PLM4_5_b1_sep16_scaffold_314_10
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9595..10029
DNA (435bp) protein (145aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFY8_THIDA
Uncharacterized protein {ECO:0000313|EMBL:KFB77851.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_314_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10026..10616
DNA (591bp) protein (197aa)
Putative lipoprotein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFY9_THIDA
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AAZ98467.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
PLM4_5_b1_sep16_scaffold_314_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10725..11171
DNA (447bp) protein (149aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00037A994E
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_314_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11232..12671
DNA (1440bp) protein (480aa)
Amidase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_5_b1_sep16_scaffold_314_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12678..13628)
DNA (951bp) protein (317aa)
NagM-like protein Tax=Ralstonia sp. PBA RepID=I9BTY2_9RALS
NagM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_314_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13633..14583)
DNA (951bp) protein (317aa)
NagM Tax=Cupriavidus sp. WS RepID=UPI0003634C0E
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_314_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14639..15547
DNA (909bp) protein (303aa)
6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating Tax=Acidithiobacillus caldus RepID=F9ZL34_ACICS
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_314_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15559..16014
DNA (456bp) protein (152aa)
Carbohydrate kinase, thermoresistant glucokinase family Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVM1_OPITP
carbohydrate kinase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_314_18
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16011..16430)
DNA (420bp) protein (140aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV74_9BURK
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_5_b1_sep16_scaffold_314_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16441..16899)
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Variovorax sp. CF313 RepID=J2JT18_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_314_20
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17038..18852
DNA (1815bp) protein (605aa)
Serine/threonine protein kinase Tax=Magnetococcus sp. (strain MC-1) RepID=A0L8Y6_MAGSM
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_314_21
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18891..19508
DNA (618bp) protein (206aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_314_22
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19489..22680)
DNA (3192bp) protein (1064aa)
Similar to ATP dependent transcriptional activator bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
transcriptional activator domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_314_23
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22798..25149)
DNA (2352bp) protein (784aa)
Cell wall/surface repeat protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAY8_ANADF
Uncharacterized protein {ECO:0000313|EMBL:KFE67753.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
cell wall/surface repeat-containing protein
PLM4_5_b1_sep16_scaffold_314_24
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25416..27077)
DNA (1662bp) protein (554aa)
Gamma-glutamyltranspeptidase Tax=Azospirillum brasilense Sp245 RepID=G8AI17_AZOBR
gamma-glutamyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_314_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27095..29179)
DNA (2085bp) protein (695aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hppA; pyrophosphatase (EC:3.6.1.1)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_314_26
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29216..29869)
DNA (654bp) protein (218aa)
Adenylate kinase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJC5_AZOSU
adenylate kinase family protein
Tax=GWA2_Rhodocyclales_65_20_curated
PLM4_5_b1_sep16_scaffold_314_27
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29866..30450)
DNA (585bp) protein (195aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000313|EMBL:EPN63312.1}; EC=2.7.7.38 {ECO:0000313|EMBL:EPN63312.1};; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. actinidiae ICMP 19096.;"
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase (Fragment) Tax=Pseudomonas syringae pv. actinidiae ICMP 19096 RepID=S6WHE4_PSESF
Displaying 27 items

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