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PLM4_5_b1_sep16_scaffold_347

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_347_1
unknown

Not on your lists

1..99
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_347_2
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96..752
DNA (657bp) protein (219aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Tax=Thauera phenylacetica B4P RepID=N6ZQM4_9RHOO
ubiquinone biosynthesis protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_347_3
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(760..1179)
DNA (420bp) protein (140aa)
Putative redox protein, regulator of disulfide bond formation Tax=Herbaspirillum sp. YR522 RepID=J3HQL8_9BURK
regulator of disulfide bond formation, redox protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_347_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1450..1878
DNA (429bp) protein (143aa)
50S ribosomal protein L13 Tax=Aquaspirillum serpens RepID=UPI0003B6F436
rplM; 50S ribosomal protein L13
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_347_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1890..2282
DNA (393bp) protein (131aa)
30S ribosomal protein S9 Tax=Methyloversatilis sp. NVD RepID=UPI0003755663
rpsI; 30S ribosomal protein S9
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_347_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2353..3132
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMF4_AZOSU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3147..3560
DNA (414bp) protein (138aa)
Integral membrane protein CcmA involved in cell shape determination Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMF5_AZOSU
Integral membrane protein CcmA involved in cell shape determination
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3590..3940
DNA (351bp) protein (117aa)
Putative iron-sulfur cluster insertion protein ErpA Tax=Methyloversatilis universalis FAM5 RepID=F5RF01_9RHOO
iron--sulfur cluster insertion protein ErpA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_347_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3993..5060)
DNA (1068bp) protein (356aa)
anmK; anhydro-N-acetylmuramic acid kinase AnmK (EC:2.7.1.170)
Anhydro-N-acetylmuramic acid kinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT61_9BURK
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_347_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5084..6343)
DNA (1260bp) protein (420aa)
Peptidase M23 Tax=Sulfuricella denitrificans skB26 RepID=S6B7A1_9PROT
metalloendopeptidase-like membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_11
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6402..7616
DNA (1215bp) protein (405aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN64_ACCPU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_347_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7613..8395
DNA (783bp) protein (261aa)
Beta-lactamase domain-containing protein Tax=Oceanibaculum indicum P24 RepID=K2K8N7_9PROT
Metallo-beta-lactamase family protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_347_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8466..9596
DNA (1131bp) protein (377aa)
Putative exported solute binding protein bin=GWA2_Methylomirabilis_73_35 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
exported solute binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9730..10845
DNA (1116bp) protein (372aa)
Putative exported solute binding protein bin=GWF2_Methylomirabilis_70_14 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
exported solute binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_347_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10945..11496
DNA (552bp) protein (184aa)
Putative transporter DctQ-like transmembrane protein bin=GWF2_Methylomirabilis_70_14 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transporter DctQ-related transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_347_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11493..12986
DNA (1494bp) protein (498aa)
Putative TRAP family transmembrane transporter protein bin=GWA2_Methylomirabilis_73_35 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP family transmembrane transporter protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13136..14263
DNA (1128bp) protein (376aa)
Aminotransferase class I and II Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M078_GEODF
class I and II aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_18
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14194..14778)
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z881_AZOL4
putative protein associated with cation transport, ChaC-like
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_347_19
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14778..15626)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Methylobacterium sp. WSM2598 RepID=UPI0003683993
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL58353.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM4_5_b1_sep16_scaffold_347_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

15654..16727
DNA (1074bp) protein (358aa)
Molybdopterin-binding oxidoreductase Tax=Arthrobacter sp. SJCon RepID=L8TL80_9MICC
molybdopterin-binding oxidoreductase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM4_5_b1_sep16_scaffold_347_21
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16790..17284
DNA (495bp) protein (165aa)
hypothetical protein Tax=Deinococcus aquatilis RepID=UPI000382DF6B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_347_22
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17281..17865
DNA (585bp) protein (195aa)
sulfopyruvate decarboxylase subunit beta (EC:4.1.1.79)
aldehyde dehydrogenase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289EC22
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17862..18347
DNA (486bp) protein (162aa)
Thiol-disulfide isomerase-like protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9Z6_9PROT
thiol-disulfide isomerase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_24
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18395..19126
DNA (732bp) protein (244aa)
Ribosomal protein L11 methyltransferase Tax=Bordetella petrii RepID=I1SZ70_9BORD
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_347_25
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19168..20544)
DNA (1377bp) protein (459aa)
Putative glycolate oxidase subunit GlcD Tax=Azoarcus sp. (strain BH72) RepID=A1K489_AZOSB
glcD2; putative glycolate oxidase subunit GlcD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_347_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20563..21300
DNA (738bp) protein (246aa)
Nitroreductase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUV0_9BURK
Nitroreductase {ECO:0000313|EMBL:EGJ12118.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
nitroreductase family protein
PLM4_5_b1_sep16_scaffold_347_27
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21300..22466
DNA (1167bp) protein (389aa)
ABC-type branched-chain amino acid transport system, periplasmic component bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_347_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22453..23352
DNA (900bp) protein (300aa)
Citrate lyase beta subunit Tax=Burkholderia sp. RPE64 RepID=R4WP02_9BURK
citrate lyase beta subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_347_29
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23439..24536
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003828BC2
major facilitator transporter
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_347_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24587..25003
DNA (417bp) protein (139aa)
Putative thioesterase family protein Tax=Oleispira antarctica RB-8 RepID=R4YKU1_OLEAN
thioesterase superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying items 1-30 of 34 in total

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