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PLM4_5_b1_sep16_scaffold_386

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_386_1
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..465
DNA (465bp) protein (155aa)
leuD; 3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit Tax=Herbaspirillum sp. JC206 RepID=UPI0002D87147
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_386_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

470..1525
DNA (1056bp) protein (352aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H0L6_METFK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_386_3
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1536..2660
DNA (1125bp) protein (375aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Q9_NITMU
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_386_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2769..5456
DNA (2688bp) protein (896aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00036B4DC3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_386_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5497..6324
DNA (828bp) protein (276aa)
tRNA pseudouridine synthase A Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIR6_AZOSU
pseudouridylate synthase I
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_386_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6321..6941
DNA (621bp) protein (207aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5''''-phosphoribosyl)anthranilate isomerase Tax=Azoarcus toluclasticus RepID=UPI00037ECEDA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_386_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6928..8127
DNA (1200bp) protein (400aa)
Tryptophan synthase beta chain (EC:4.2.1.20)
tryptophan synthase subunit alpha Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000371E355
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_386_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8127..8924
DNA (798bp) protein (266aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z708_9RHOO
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_386_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8921..9790
DNA (870bp) protein (290aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta Tax=Dechloromonas aromatica (strain RCB) RepID=ACCD_DECAR
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_386_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9787..11085
DNA (1299bp) protein (433aa)
folylpolyglutamate synthase Tax=Methyloversatilis sp. NVD RepID=UPI000361538B
folylpolyglutamate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_386_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11078..11671
DNA (594bp) protein (198aa)
sporulation protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035D5DB3
sporulation related
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_386_12
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11673..12164
DNA (492bp) protein (164aa)
Colicin V production protein Tax=Methylovorus RepID=C6XE11_METSD
cvpA; colicin v production protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_386_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12193..13713
DNA (1521bp) protein (507aa)
Amidophosphoribosyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6A9U7_9PROT
amidophosphoribosyltransferase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_386_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13833..15005
DNA (1173bp) protein (391aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_386_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15002..15736)
DNA (735bp) protein (245aa)
UDP-2,3-diacylglucosamine hydrolase Tax=Sulfuricella denitrificans skB26 RepID=S6AJN6_9PROT
UDP-2,3-diacylglucosamine hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_386_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15748..16332)
DNA (585bp) protein (195aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Nitrosospira sp. APG3 RepID=M5DV05_9PROT
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_386_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16329..17483)
DNA (1155bp) protein (385aa)
ErfK/YbiS/YcfS/YnhG Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HK8_DECAR
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_386_18
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17495..18457)
DNA (963bp) protein (321aa)
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_386_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18557..19921
DNA (1365bp) protein (455aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase Tax=Herbaspirillum sp. JC206 RepID=UPI0002DF03F0
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_386_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19918..20982)
DNA (1065bp) protein (355aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A62_DECAR
extracellular ligand-binding receptor
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AAZ48269.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
PLM4_5_b1_sep16_scaffold_386_21
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20984..22111)
DNA (1128bp) protein (376aa)
Chaperone protein DnaJ Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHM3_AZOSU
chaperone protein DnaJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_386_22
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22191..24131)
DNA (1941bp) protein (647aa)
Chaperone protein DnaK Tax=Thauera sp. 63 RepID=N6YCH4_9RHOO
dnaK; chaperone protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_386_23
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24142..24723)
DNA (582bp) protein (194aa)
Protein GrpE Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6ZD82_9RHOO
grpE; heat shock protein GrpE
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_386_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24930..25331
DNA (402bp) protein (134aa)
pilus response regulator PilG Tax=Methylotenera sp. 1P/1 RepID=UPI000377E490
response regulator receiver
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_386_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25358..25723
DNA (366bp) protein (122aa)
chemotaxis protein CheY Tax=Herbaspirillum sp. JC206 RepID=UPI0002D62353
pilH; twitching motility two-component response regulator transcription regulator protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_386_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25723..26181
DNA (459bp) protein (153aa)
CheW protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK04_ACCPU
CheW protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_386_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26239..28356
DNA (2118bp) protein (706aa)
Methyl-accepting chemotaxis protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGI8_AZOSU
methyl-accepting chemotaxis protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_386_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28365..33377
DNA (5013bp) protein (1671aa)
CheA signal transduction histidine kinase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK06_ACCPU
CheA signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_386_29
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33374..34705
DNA (1332bp) protein (444aa)
Cyclic nucleotide-binding protein Tax=Methyloversatilis universalis FAM5 RepID=F5RHP1_9RHOO
cyclic nucleotide-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_386_30
unknown

Not on your lists

34715..34948
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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