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PLM4_5_b1_sep16_scaffold_481

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_481_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..767
DNA (765bp) protein (255aa)
long-chain fatty acid--CoA ligase Tax=Herbaspirillum sp. JC206 RepID=UPI00037999C8
long-chain-fatty-acid--CoA ligase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_481_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

764..1528
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase bin=GWB2_Geobacter-like_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_481_3
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1548..2150
DNA (603bp) protein (201aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI00036A8B04
N-acetylmuramoyl-L-alanine amidase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_481_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2138..3007
DNA (870bp) protein (290aa)
Putative peptidase, S33 family bin=GWA2_Methylomirabilis_73_35 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase fold protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_481_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3004..3456
DNA (453bp) protein (151aa)
putative acyl dehydratase with a MaoC-like domain (EC:4.2.1.-)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002F2E1DC
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_481_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3526..4569
DNA (1044bp) protein (348aa)
Putative uncharacterized protein Tax=Achromobacter xylosoxidans C54 RepID=E5U330_ALCXX
cyclase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_481_7

Not on your lists

4566..5315
DNA (750bp) protein (250aa)
Putative short-chain dehydrogenase/reductase SDR Tax=uncultured bacterium 888 RepID=B8R8R5_9BACT
Putative short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACF98071.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 888.;"
short-chain dehydrogenase/reductase SDR
PLM4_5_b1_sep16_scaffold_481_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5312..5788
DNA (477bp) protein (159aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003736CF8
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_5_b1_sep16_scaffold_481_9
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5781..7382
DNA (1602bp) protein (534aa)
betA; choline dehydrogenase (EC:1.1.99.1)
Choline dehydrogenase, a flavoprotein Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZGE8_9GAMM
Choline dehydrogenase, a flavoprotein {ECO:0000313|EMBL:EIT70807.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
PLM4_5_b1_sep16_scaffold_481_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7379..8665
DNA (1287bp) protein (429aa)
ABC transporter ATP-binding protein Tax=Elioraea tepidiphila RepID=UPI000366D135
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKE69538.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ABC transporter ATP-binding protein
PLM4_5_b1_sep16_scaffold_481_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8671..9429
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein Tax=alpha proteobacterium BAL199 RepID=A8TLT1_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EDP66159.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ABC transporter ATP-binding protein
PLM4_5_b1_sep16_scaffold_481_12
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9429..10133
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein Tax=Oceanibaculum indicum P24 RepID=K2IHF1_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKE69536.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
livF; leucine/isoleucine/valine transporter ATP-binding subunit
PLM4_5_b1_sep16_scaffold_481_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10133..11005
DNA (873bp) protein (291aa)
ABC transporter permease Tax=Oceanibaculum indicum P24 RepID=K2JWC5_9PROT
ABC transporter permease {ECO:0000313|EMBL:EKE69535.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ABC transporter permease
PLM4_5_b1_sep16_scaffold_481_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11002..11997
DNA (996bp) protein (332aa)
ABC transporter permease protein Tax=alpha proteobacterium BAL199 RepID=A8TLS8_9PROT
ABC transporter permease protein {ECO:0000313|EMBL:EDP66156.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ABC transporter permease
PLM4_5_b1_sep16_scaffold_481_15
bacterium YEK0313, Bacteria

Not on your lists

comp(11972..12715)
DNA (744bp) protein (248aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029B1E8E
Uncharacterized protein {ECO:0000313|EMBL:CEJ13098.1}; species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_481_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12739..13482
DNA (744bp) protein (248aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPY9_THISH
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_481_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13479..14309
DNA (831bp) protein (277aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000305CBC5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_481_18
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14306..17239
DNA (2934bp) protein (978aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D54C4
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_481_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17236..18189)
DNA (954bp) protein (318aa)
Uncharacterized protein UPF0065 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FW4_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_481_20
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18202..19200)
DNA (999bp) protein (333aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase Tax=Brevibacillus borstelensis AK1 RepID=M8E8E1_9BACL
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:EMT51745.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
nbaD; 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
PLM4_5_b1_sep16_scaffold_481_21
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19224..20021
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Burkholderia RepID=A4JFY8_BURVG
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_481_22
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19999..20502)
DNA (504bp) protein (168aa)
OsmC-like protein Tax=Magnetospirillum gryphiswaldense RepID=A4U141_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_481_23
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20513..21163)
DNA (651bp) protein (217aa)
Tetratricopeptide TPR_2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_481_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21177..21653
DNA (477bp) protein (159aa)
Putative uncharacterized protein Tax=Hydrogenophaga sp. PL2G6 RepID=B4Y347_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_481_25
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21692..22978
DNA (1287bp) protein (429aa)
Arylsulfatase (EC:3.1.6.1)
twin-arginine translocation pathway signal protein Tax=Curvibacter lanceolatus RepID=UPI0003707500
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_481_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23132..24325
DNA (1194bp) protein (398aa)
hypothetical protein, partial Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00035CC8F3
gamma-glutamyltranspeptidase, putative
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_481_27
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24434..25429
DNA (996bp) protein (332aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0003735BED
Bradyrhizobium elkanii strain UASWS1015 Contig167, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51042.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_481_28
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25444..25752
DNA (309bp) protein (103aa)
Antibiotic biosynthesis monooxygenase Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGX1_METS4
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ACA15814.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
PLM4_5_b1_sep16_scaffold_481_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25752..26999
DNA (1248bp) protein (416aa)
Tetracycline-efflux transporter Tax=Collimonas fungivorans (strain Ter331) RepID=G0AKE9_COLFT
Tetracycline-efflux transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_481_30
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27010..27777
DNA (768bp) protein (256aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI000361DC2C
Uncharacterized protein {ECO:0000313|EMBL:ETW94162.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative aldolase class 2 protein
Displaying items 1-30 of 48 in total

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