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PLM4_5_b1_sep16_scaffold_533

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_533_1
unknown

Not on your lists

comp(1..273)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_533_2
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(270..1130)
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JS07_9GAMM
Glutamate/aspartate periplasmic-binding protein {ECO:0000313|EMBL:EXI88970.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
family 3 extracellular solute-binding protein
PLM4_5_b1_sep16_scaffold_533_3
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1155..3503)
DNA (2349bp) protein (783aa)
Putative fatty acid cis/trans isomerase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q608B2_METCA
fatty acid cis/trans isomerase
Putative fatty acid cis/trans isomerase {ECO:0000313|EMBL:AAU92135.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM4_5_b1_sep16_scaffold_533_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3513..4874)
DNA (1362bp) protein (454aa)
Uncharacterized protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZF4_RAMTT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_533_5
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4891..5685
DNA (795bp) protein (265aa)
Vitamin k-dependent gamma-carboxylase Tax=Leptolyngbya sp. Heron Island J RepID=U9WF88_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KGJ95834.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp. ND16A.;"
vitamin K-dependent gamma-carboxylase
PLM4_5_b1_sep16_scaffold_533_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5687..6211
DNA (525bp) protein (175aa)
Vitamin K-dependent gamma-carboxylase Tax=Leptolyngbya sp. PCC 6406 RepID=L8L9L9_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KGJ95834.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp. ND16A.;"
vitamin K-dependent gamma-carboxylase
PLM4_5_b1_sep16_scaffold_533_7
Pseudoalteromonas haloplanktis, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6195..6611
DNA (417bp) protein (139aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI00037D6F44
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI86386.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas haloplanktis (strain TAC 125).;"
PLM4_5_b1_sep16_scaffold_533_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6699..7544)
DNA (846bp) protein (282aa)
ATPase AAA Tax=Herbaspirillum sp. JC206 RepID=UPI0002D31DCF
ATPase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_533_9
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7597..7935
DNA (339bp) protein (113aa)
cytochrome C Tax=Herbaspirillum lusitanum RepID=UPI0003095325
Cytochrome c553 {ECO:0000313|EMBL:EJL91639.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
cytochrome c, class I
PLM4_5_b1_sep16_scaffold_533_10
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7932..8258
DNA (327bp) protein (109aa)
cyc; Cyc (EC:1.9.3.1)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=T0AS45_9RHOO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_533_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8249..8890)
DNA (642bp) protein (214aa)
Endonuclease III (EC:4.2.99.18)
Endonuclease III Tax=Achromobacter piechaudii HLE RepID=J4YP39_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_533_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8887..9240)
DNA (354bp) protein (118aa)
hypothetical protein Tax=Bordetella sp. FB-8 RepID=UPI00037C33C1
ferredoxin
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_533_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9210..10226)
DNA (1017bp) protein (339aa)
dihydroorotate oxidase (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RU74_ACCPU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_533_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10229..10978)
DNA (750bp) protein (250aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLX6_ACCPU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_533_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10962..11669)
DNA (708bp) protein (236aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_533_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11663..12358)
DNA (696bp) protein (232aa)
Rieske-I iron sulfur protein-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX84_RAMTT
Rieske-I iron sulfur protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_533_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12431..13732)
DNA (1302bp) protein (434aa)
Ammonium transporter Tax=uncultured bacterium RepID=C5JAT5_9BACT
amtB; ammonia channel
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_533_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13783..14316)
DNA (534bp) protein (178aa)
NUDIX [(Di)nucleoside polyphosphate] hydrolase Tax=Azoarcus sp. KH32C RepID=H0PZS9_9RHOO
NUDIX [(di)nucleoside polyphosphate] hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_533_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14300..14944)
DNA (645bp) protein (215aa)
haloacid dehalogenase (EC:3.8.1.2)
Haloacid dehalogenase, type II Tax=Exiguobacterium antarcticum (strain B7) RepID=K0AGR8_EXIAB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_533_20
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14968..16602
DNA (1635bp) protein (545aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00030E17D6
AMP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_533_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16602..17618
DNA (1017bp) protein (339aa)
Pyridine nucleotide-disulfide oxidoreductase family protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLA2_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_533_22
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17608..18051)
DNA (444bp) protein (148aa)
Acyl dehydratase Tax=uncultured gamma proteobacterium HF0770_33G18 RepID=E7C7L0_9GAMM
MaoC domain-containing protein dehydratase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_533_23
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18089..19027
DNA (939bp) protein (313aa)
Hypothetical conserved protein bin=GWC2_Methylomirabilis_70_24 species=Oceanobacillus iheyensis genus=Oceanobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_533_24
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19024..19488
DNA (465bp) protein (155aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bhargavaea cecembensis genus=Bhargavaea taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_533_25
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19492..21015
DNA (1524bp) protein (508aa)
Hypothetical conserved protein bin=GWA2_Methylomirabilis_73_35 species=Oceanobacillus iheyensis genus=Oceanobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_533_trna_1
unknown

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comp(21029..21101)
DNA (73bp)
transferRNA Arg
PLM4_5_b1_sep16_scaffold_533_26
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21173..21604
DNA (432bp) protein (144aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034A0074
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 27 items

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