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PLM4_5_b1_sep16_scaffold_592

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_592_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1161)
DNA (1161bp) protein (387aa)
CoA binding domain protein (Fragment) Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPT7_9PROT
CoA-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_592_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1190..1966
DNA (777bp) protein (259aa)
gluconate 5-dehydrogenase (EC:1.1.1.69)
gluconate 2-dehydrogenase Tax=Herbaspirillum sp. JC206 RepID=UPI00030119FE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_592_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1963..2394
DNA (432bp) protein (144aa)
Thioesterase superfamily protein Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SX41_POLSQ
thioesterase superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_592_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2396..3115
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIQ5_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_592_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3105..4133)
DNA (1029bp) protein (343aa)
Major facilitator superfamily MFS_1 Tax=alpha proteobacterium BAL199 RepID=A8U3U0_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_592_6
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4387..5154)
DNA (768bp) protein (256aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI000317030B
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_592_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5141..5833)
DNA (693bp) protein (231aa)
Glutathione S-transferase with thioredoxin-like domain (EC:2.5.1.18)
Glutathione S-transferase with thioredoxin-like domain Tax=Ralstonia syzygii R24 RepID=G2ZZS3_9RALS
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_592_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5830..6822)
DNA (993bp) protein (331aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Thiomonas intermedia (strain K12) RepID=D5X1G9_THIK1
alcohol dehydrogenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_592_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7083..7358
DNA (276bp) protein (92aa)
Probable Fe(2+)-trafficking protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZZ5_RAMTT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_592_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7361..7762
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DGB5_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_592_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7864..9159
DNA (1296bp) protein (432aa)
radical SAM protein bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_592_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9172..10443
DNA (1272bp) protein (424aa)
phosphoribosylglycinamide synthetase bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_592_13

Not on your lists

comp(10564..11337)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DM16_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98286.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
enoyl-CoA hydratase/isomerase family protein
PLM4_5_b1_sep16_scaffold_592_14
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11334..12278)
DNA (945bp) protein (315aa)
2-nitropropane dioxygenase Tax=Nevskia ramosa RepID=UPI0003B44E2F
2-nitropropane dioxygenase {ECO:0000313|EMBL:KIF80157.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_592_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12278..14389)
DNA (2112bp) protein (704aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002F8448E
3-hydroxyacyl-CoA dehydrogenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_592_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14389..15594)
DNA (1206bp) protein (402aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase Tax=Herbaspirillum sp. JC206 RepID=UPI0002F4E79B
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_592_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15587..16744)
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase Tax=Curvibacter lanceolatus RepID=UPI000382E302
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_592_18
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16798..17649
DNA (852bp) protein (284aa)
Short-chain dehydrogenase/reductase SDR Tax=Alicycliphilus denitrificans RepID=E8TT05_ALIDB
short-chain dehydrogenase/reductase sdr
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_592_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17649..19259
DNA (1611bp) protein (537aa)
Carboxylase Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XZT4_9RHOO
carboxyl transferase domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_592_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19334..19852
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZYN9_DEIPD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_592_21
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20057..20290
DNA (234bp) protein (78aa)
RNA polymerase sigma factor Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLR1_METPP
RNA polymerase sigma-e factor sigma-24
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
Displaying 21 items

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