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PLM4_5_b1_sep16_scaffold_715

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_715_1
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57..803
DNA (747bp) protein (249aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tax=Aromatoleum aromaticum (strain EbN1) RepID=HIS4_AROAE
hisA; 1-(5-phosphoribosyl)-5-(5-phosphoribosylamino) methylideneamino imidazole-4-carboxamide isomerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_715_2
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

803..1564
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=HIS6_NITMU
imidazoleglycerol phosphate synthase, cyclase subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_715_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1561..1947
DNA (387bp) protein (129aa)
hisI; phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase Tax=Marinobacter sp. C1S70 RepID=U7NKY1_9ALTE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_715_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1944..2276
DNA (333bp) protein (111aa)
phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5APV6_BURRH
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_715_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2273..2632
DNA (360bp) protein (120aa)
HIT family hydrolase Tax=Methyloversatilis universalis RepID=UPI000376FBE7
HIT family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_715_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2642..2863
DNA (222bp) protein (74aa)
Sec-independent protein translocase protein TatA Tax=Thauera sp. 63 RepID=N6XCS8_9RHOO
tatA; twin arginine translocase A
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_715_7
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2925..3275
DNA (351bp) protein (117aa)
Sec-independent protein translocase protein TatB Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNH3_AZOSU
twin arginine-targeting protein translocase TatB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_715_8
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3272..4027
DNA (756bp) protein (252aa)
Sec-independent protein translocase protein TatC Tax=Methyloversatilis universalis FAM5 RepID=F5RDS5_9RHOO
tatC; Sec-independent protein translocase subunit C
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_715_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4067..4237
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_715_10
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4293..5318)
DNA (1026bp) protein (342aa)
Putative ABC TRANSPORTER, membrane component Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R2M2_CUPTR
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_715_11
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5323..6309)
DNA (987bp) protein (329aa)
Branched-chain amino acid ABC-type transport system, permease component Tax=Microvirga sp. WSM3557 RepID=I4YW39_9RHIZ
ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_715_12
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6306..7031)
DNA (726bp) protein (242aa)
ABC transporter ATP-binding protein Tax=Massilia niastensis RepID=UPI00036D81FE
livF; High-affinity branched-chain amino acid transport ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_715_13
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7024..7785)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Novispirillum itersonii RepID=UPI00035E5B8E
ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_715_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7876..9063)
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036E952A
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_715_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9110..10279)
DNA (1170bp) protein (390aa)
Periplasmic serine protease, Do/DeqQ family Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNH6_AZOSU
periplasmic serine protease, Do/DeqQ family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_715_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10414..11007
DNA (594bp) protein (198aa)
petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit Tax=Thauera RepID=N6X533_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_715_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11011..12294
DNA (1284bp) protein (428aa)
Cytochrome b Tax=Methylovorus RepID=C6X8R2_METSD
cytochrome b/b6 protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_715_18
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12306..12950
DNA (645bp) protein (215aa)
Cytochrome c1 subunit of cytochrome bc1 Tax=Azoarcus sp. KH32C RepID=H0PXK3_9RHOO
cytochrome c1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_715_19
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13021..13620
DNA (600bp) protein (200aa)
RegF Tax=Herbaspirillum sp. JC206 RepID=UPI0003659585
glutathione S-transferase domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_715_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13625..14086
DNA (462bp) protein (154aa)
Stringent starvation protein B Tax=Burkholderia gladioli (strain BSR3) RepID=F2LI13_BURGS
stringent starvation protein B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_715_trna_1
unknown

Not on your lists

14100..14172
DNA (73bp)
transferRNA Thr
PLM4_5_b1_sep16_scaffold_715_21
unknown

Not on your lists

comp(14180..14542)
DNA (363bp) protein (121aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_715_22
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14556..14801)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM4_5_b1_sep16_scaffold_715_23

Not on your lists

comp(14871..16265)
DNA (1395bp) protein (465aa)
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6)
PEP-CTERM system-associated sugar transferase Tax=uncultured bacterium CSLC3 RepID=G4WVT6_9BACT
PEP-CTERM system-associated sugar transferase {ECO:0000313|EMBL:AEQ20538.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium CSLC3.;"
PLM4_5_b1_sep16_scaffold_715_24

Not on your lists

comp(16758..17798)
DNA (1041bp) protein (347aa)
Vi polysaccharide biosynthesis protein TviC Tax=uncultured bacterium CSL132 RepID=G4WVI7_9BACT
Vi polysaccharide biosynthesis protein TviC {ECO:0000313|EMBL:AEQ20439.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium CSL132.;"
nucleoside-diphosphate-sugar epimerase
PLM4_5_b1_sep16_scaffold_715_25

Not on your lists

comp(17798..17992)
DNA (195bp) protein (65aa)
Vi polysaccharide biosynthesis protein TviB (Fragment) Tax=uncultured bacterium CSL132 RepID=G4WVI6_9BACT
Vi polysaccharide biosynthesis protein TviB {ECO:0000313|EMBL:AEQ20438.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium CSL132.;"
UDP-glucose/GDP-mannose dehydrogenase
Displaying 26 items

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