ggKbase home page

PLM4_5_b1_sep16_scaffold_966

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_966_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1576
DNA (1575bp) protein (525aa)
nrdA; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=Sulfuricella denitrificans skB26 RepID=S6AM96_9PROT
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_966_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1576..2715
DNA (1140bp) protein (380aa)
Ribonucleoside-diphosphate reductase subunit beta Tax=Nitrosospira sp. APG3 RepID=M5DLC5_9PROT
ribonucleotide reductase, small chain family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_966_3
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2726..2974
DNA (249bp) protein (83aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_966_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3090..3371
DNA (282bp) protein (94aa)
hypothetical protein Tax=Bordetella sp. FB-8 RepID=UPI000369CF65
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_966_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3817..4485
DNA (669bp) protein (223aa)
Transglycosylase Tax=Azoarcus sp. KH32C RepID=H0PRY4_9RHOO
mltE; transglycosylase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_966_6
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4632..4961
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J3CRU9_9BURK
Bll2215 protein {ECO:0000313|EMBL:CDS49673.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_966_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4958..6142)
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTM9_THISH
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_966_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6217..8514
DNA (2298bp) protein (766aa)
malic enzyme Tax=Methyloversatilis sp. NVD RepID=UPI00035F0018
malic enzyme, NAD binding domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_966_9
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8527..9705
DNA (1179bp) protein (393aa)
Patatin Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HS2_DECAR
putative esterase of the alpha-beta hydrolase superfamily
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_966_10
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9714..10103
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5RC99_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_966_11
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10132..11103
DNA (972bp) protein (324aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEN8_ANADF
alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_966_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11214..11459)
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0PWL5_9RHOO
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
PLM4_5_b1_sep16_scaffold_966_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11524..12165
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0Y1_AROAE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_966_14
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12162..13067
DNA (906bp) protein (302aa)
Cobalamin biosynthesis protein CobD Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJA3_AZOSU
cobalamin biosynthesis protein CbiB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_966_15
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13064..13357)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NN09_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_966_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13357..13686)
DNA (330bp) protein (110aa)
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Nitrosomonas sp. AL212 RepID=F9ZD85_9PROT
transcriptional coactivator/pterin dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_966_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13695..14768)
DNA (1074bp) protein (358aa)
Peptidase M48 Ste24p Tax=Sulfuricella denitrificans skB26 RepID=S6ACQ1_9PROT
peptidase M48 Ste24p
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 17 items

View Taxonomy