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PLM4_5_b1_sep16_scaffold_135_25

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(28255..29064)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA Tax=Herbaspirillum sp. JC206 RepID=UPI0002EBE355 similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 255.0
  • Bit_score: 401
  • Evalue 6.60e-109
PP-loop domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 262.0
  • Bit_score: 396
  • Evalue 3.50e-108
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 267.0
  • Bit_score: 432
  • Evalue 2.90e-118

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGAATGTCGTCAAGCTGCACCGCGACCCGCGTCGCGAGGACTATGAAGCCAACAAGCTCGCCAAGCGCCTGCGCCGCCAGGTGGGCGAGGCGATCGCCGATTTCGGCATGATCGAAGAAGGCGACAGGGTCATGGTGTGCCTCTCGGGCGGCAAGGACAGCTACGGCCTGCTCGACGTGCTGGTGGCGCTGCGGGAGAAGGCGCCGGTGTCGTTCGACCTCGTCGCGGTCAACCTCGACCAGAAGCAGCCGGGGTTCCCAGCGCAGGTGCTGCCAGATTACCTCTCGGGCCTCGGCGTGTCGTTCAGGATCGTCGAGCAGGATACCTACTCGGTAGTGAAGCGCGTGCTGCCCGAGGGCAAGACCCTGTGCTCGCTCTGCTCGCGGCTGCGCCGCGGCGTGCTTTACCGCGTGGCGGGCGAACTGGGTGCGACCAAGATCGCGCTGGGGCACCATCGCGACGATATCCTGGCGACTTTTTTCCTCAACCTGTTCTTCGGCGGGCAGCTCAAAGCCATGCCGCCCAAGCTCAAGTCGGACGACGGCAGGCACATCGTCATCCGGCCGCTCGCCTACGTGAAGGAAGACGACCTCGCCGCCTACGCCGCGGAGAAGGGTTTCCCCATCATCCCCTGCAACCTGTGCGGCTCGCAGGAGCACCTGCAGCGGCGCCAGGTGCGCGAGCAGTTGCGGCAATGGGAAAGCCAATTCCCGGGGCGCGTAGAATCGATCCTGCGCGCGCTCACCGACGTGCGGCCTTCGCATCTGCTGGATCGCAAATTGTTCGGTTTCTCGGACCTGAAGACATGA
PROTEIN sequence
Length: 270
MNVVKLHRDPRREDYEANKLAKRLRRQVGEAIADFGMIEEGDRVMVCLSGGKDSYGLLDVLVALREKAPVSFDLVAVNLDQKQPGFPAQVLPDYLSGLGVSFRIVEQDTYSVVKRVLPEGKTLCSLCSRLRRGVLYRVAGELGATKIALGHHRDDILATFFLNLFFGGQLKAMPPKLKSDDGRHIVIRPLAYVKEDDLAAYAAEKGFPIIPCNLCGSQEHLQRRQVREQLRQWESQFPGRVESILRALTDVRPSHLLDRKLFGFSDLKT*