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PLM4_5_b1_sep16_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_135_1
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..517
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z7P2_9BRAD
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
PLM4_5_b1_sep16_scaffold_135_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

551..3148
DNA (2598bp) protein (866aa)
sporulation domain-containing protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sporulation domain-containing protein
Tax=GWE1_Burkholderiales_65_30_curated
PLM4_5_b1_sep16_scaffold_135_3
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3176..3985)
DNA (810bp) protein (270aa)
3-oxoacyl-ACP reductase Tax=Bradyrhizobium japonicum RepID=UPI000363C49A
Putative short-chain dehydrogenase {ECO:0000313|EMBL:EJZ32578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
oxidoreductase
PLM4_5_b1_sep16_scaffold_135_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4012..5166)
DNA (1155bp) protein (385aa)
Serine/threonine protein kinase bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_135_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5166..5876)
DNA (711bp) protein (237aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_135_6
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6081..7496
DNA (1416bp) protein (472aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
S-adenosyl-L-homocysteine hydrolase Tax=Methyloversatilis universalis RepID=UPI00035D9BE0
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_135_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7507..7869
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Oxalobacter formigenes OXCC13 RepID=C3XBX3_OXAFO
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_135_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7873..8787
DNA (915bp) protein (305aa)
hypothetical protein Tax=Streptomyces sp. FxanaD5 RepID=UPI00036D81CE
2-dehydropantoate 2-reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8777..9601
DNA (825bp) protein (275aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase Tax=Sulfuricella denitrificans skB26 RepID=S6AEP9_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_135_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9598..11421
DNA (1824bp) protein (608aa)
Adenylate/guanylate cyclase with Chase sensor Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTW4_SIDLE
adenylate/guanylate cyclase with Chase sensor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11418..11906
DNA (489bp) protein (163aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI00037F7C47
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11903..12733
DNA (831bp) protein (277aa)
Peptidase M48 Ste24p Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTW2_SIDLE
peptidase M48 Ste24p
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_13
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12891..13454
DNA (564bp) protein (188aa)
hypothetical protein Tax=Duganella zoogloeoides RepID=UPI00037202F0
ompA-like transmembrane domain protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
PLM4_5_b1_sep16_scaffold_135_14
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13805..14380
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Thiothrix nivea DSM 5205 RepID=I3BYL2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFI05195.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_135_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14386..18675)
DNA (4290bp) protein (1430aa)
Uncharacterized protein Tax=Neptuniibacter caesariensis RepID=Q2BPY0_NEPCE
MSHA biogenesis protein, MshQ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18742..19785)
DNA (1044bp) protein (348aa)
Membrane-bound metal-dependent hydrolase Tax=Thauera sp. 63 RepID=N6XZX8_9RHOO
membrane-bound metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19800..21299)
DNA (1500bp) protein (500aa)
Serine:pyruvate/alanine:glyoxylate aminotransferase Tax=mine drainage metagenome RepID=T1AAE5_9ZZZZ
serine-pyruvate transaminase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_18
unknown

Not on your lists

comp(21320..21490)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_135_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21565..23274
DNA (1710bp) protein (570aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
acetolactate synthase catalytic subunit (EC:2.2.1.6)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_20
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23271..24485
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QIK9_RALPI
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_135_21
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24535..25482
DNA (948bp) protein (316aa)
Cyclase family protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIV6_TISMK
cyclase family protein
Tax=RBG_16_Gamma2_60_9_curated
PLM4_5_b1_sep16_scaffold_135_22
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25475..26053)
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TF1_NITEU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_135_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26203..27300)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Pseudomonas pyrrocinia RepID=UPI0002F801D2
gentisate 1,2-dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_135_24
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27305..28258)
DNA (954bp) protein (318aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI000375AF74
bug61; NagM-like protein
Putative NagM-like protein {ECO:0000313|EMBL:ADZ70905.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
PLM4_5_b1_sep16_scaffold_135_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28255..29064)
DNA (810bp) protein (270aa)
tRNA 2-thiocytidine biosynthesis protein TtcA Tax=Herbaspirillum sp. JC206 RepID=UPI0002EBE355
PP-loop domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_135_26
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29072..29821)
DNA (750bp) protein (250aa)
Pteridine reductase Tax=Azoarcus sp. KH32C RepID=H0PWW7_9RHOO
pteridine reductase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_135_27
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29850..30944
DNA (1095bp) protein (365aa)
Uncharacterized protein Tax=Thauera sp. 28 RepID=N6YB63_9RHOO
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_135_28
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30949..31587
DNA (639bp) protein (213aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI00037E069A
putative uncharacterized protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_135_29
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31602..32225)
DNA (624bp) protein (208aa)
Putative glutathione S-transferase (EC:2.5.1.18)
Putative glutathione S-transferase Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2I6_9PROT
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_135_30
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32271..32465
DNA (195bp) protein (65aa)
hypothetical protein Tax=Cupriavidus sp. WS RepID=UPI000365013D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying items 1-30 of 43 in total

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