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PLM4_5_b1_sep16_scaffold_139_3

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(1040..1687)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Fodinicurvata sediminis RepID=UPI0003B60941 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 196.0
  • Bit_score: 190
  • Evalue 1.10e-45
rpoE_[H]; RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 188.0
  • Bit_score: 177
  • Evalue 2.10e-42
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 192.0
  • Bit_score: 204
  • Evalue 1.30e-49

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Taxonomy

R_Nitrospirae_66_17 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 648
ATGGCGATATCGAGGGAAGCATTTGGGGAACAGGTGCTTGCGCTGGTGGGCAGCCTGCACGGCGTAGCGTGCAGGCTCACCGGCAACGATACTGACGCCGAGGATCTGGTGGCGGAGAGCGTGGCGCGCGCGTGGAAGGCACTCGACTCGCTGGAGTCCGACGCGGCGTTCCGCGCCTGGATTTTCCGCATACTGCATAACACTTTCGTCAGCGAGAGGCGCCGCGCCAACGCCCGGCCGCAGTGCGACCCGATCGATGGCGAGGACCTGGATGAAGCGGAACCCGTGTTCTCGATTTTCGAGCAGATGCATCAGCCGTTCCTGCTCTGGTTCAGCAATCCCGAGCAGGAGTTTCTCGACCGGCTGCTGCGCGAGGATCTCGAGCGGGCGCTGGCGACGCTGCCGGAACACCATCGCGTGGTCGTGATCCTGGCCGACCTCGAGGAGTTCAACTATCGGGAGATCGCCGACACGCTCGGTGTCCCGCTCGGCACGGTGCGGTCGCGCCTGGCGCGGGCCCGCGGTACGCTGCAGAAGCTGCTGTGGGAGCAGGCTCAGGCACGCGGACTGCGCGGCGACGCTGCGACTGCAGCTGCAGAAGGTCGAGCGGCGGGCGTTCCGCGCGCCAAATCAGGAAAGGAAGCTTGA
PROTEIN sequence
Length: 216
MAISREAFGEQVLALVGSLHGVACRLTGNDTDAEDLVAESVARAWKALDSLESDAAFRAWIFRILHNTFVSERRRANARPQCDPIDGEDLDEAEPVFSIFEQMHQPFLLWFSNPEQEFLDRLLREDLERALATLPEHHRVVVILADLEEFNYREIADTLGVPLGTVRSRLARARGTLQKLLWEQAQARGLRGDAATAAAEGRAAGVPRAKSGKEA*