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PLM4_5_b1_sep16_scaffold_352_26

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(21996..22595)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH9_AZOSU similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 199.0
  • Bit_score: 328
  • Evalue 2.40e-87
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 199.0
  • Bit_score: 328
  • Evalue 6.70e-88
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 199.0
  • Bit_score: 364
  • Evalue 5.50e-98

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Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGTCTGAGCGCGACATCGACCAGCAGTTGGTGCAGCGCGCCCAGCGCGGGGACAAGCGCGCCTTCGAGCTGCTGGTGGAAAAGTACCAGCGCAAACTGGGCCGGCTGCTGGCGCGGTTCATCCGCGATCCGGCCGAGGTGGAGGATGTGACGCAGGAAGCGTTCATCAAGGCATACCGGGCACTTCCCGCGTTTCGCGGCGACAGCGCGTTTTATACGTGGCTGTACCGCATCGGCATCAATACCGCCAAGAATTACCTGATGGCACTGGGGCGGCGGGCCCCCACCTCCACCGAGGTGGAGGCCGAGGACGCGGAGGGTTTCGAGGACGCGGAGCAGTTGCGCGACATCAACACGCCGGAGAGCATGTTGCTGTCCAAGGAGATCGCCACGACGGTGAACGCGACGATCGAGGAGCTGCCCGAGGAATTGCGCACGGCGATACAGTTGCGCGAAATCGAGGGCATGAGTTACGAGGATATCGCGCGCATAATGGATTGCCCGATCGGCACTGTGCGCTCGCGGATCTTCAGGGCGCGAGAGGCGATCGCGGAACGGCTGCGGCCGCTGCTCGATACGCGCAAGGACCAGAGGTGGTAG
PROTEIN sequence
Length: 200
MSERDIDQQLVQRAQRGDKRAFELLVEKYQRKLGRLLARFIRDPAEVEDVTQEAFIKAYRALPAFRGDSAFYTWLYRIGINTAKNYLMALGRRAPTSTEVEAEDAEGFEDAEQLRDINTPESMLLSKEIATTVNATIEELPEELRTAIQLREIEGMSYEDIARIMDCPIGTVRSRIFRAREAIAERLRPLLDTRKDQRW*