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PLM4_5_b1_sep16_scaffold_352

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Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_352_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..498
DNA (498bp) protein (166aa)
tmk; thymidylate kinase (EC:2.7.4.9)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI000380306F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_352_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

495..1481
DNA (987bp) protein (329aa)
DNA polymerase III delta prime subunit (EC:2.7.7.7)
DNA polymerase III subunit delta'''' Tax=Janthinobacterium lividum RepID=UPI000289BFF2
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_352_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1560..1991)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Burkholderia kururiensis RepID=UPI00034B4397
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_352_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2261..3073)
DNA (813bp) protein (271aa)
hydratase/decarboxylase (EC:4.1.1.77)
Putative hydratase/decarboxylase Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EMT0_BRASB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_352_5
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3142..3516
DNA (375bp) protein (125aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037EF03B
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
anti-anti-sigma regulatory factor, SpoIIAA
PLM4_5_b1_sep16_scaffold_352_6
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3522..6566
DNA (3045bp) protein (1015aa)
Putative chase2 sensor protein Tax=Janthinobacterium sp. HH01 RepID=L9PD84_9BURK
stage II sporulation E family protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM4_5_b1_sep16_scaffold_352_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6501..7097)
DNA (597bp) protein (199aa)
OmpA/MotB domain protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIR6_ACCPU
OmpA/MotB domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM4_5_b1_sep16_scaffold_352_8
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7098..7553)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Janthinobacterium sp. HH01 RepID=L9PB73_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX08801.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_352_9
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

7611..8030
DNA (420bp) protein (140aa)
Putative anti-sigma regulatory factor serine/threonine protein kinase Tax=Coraliomargarita sp. CAG:312 RepID=R7L7Z0_9BACT
Putative anti-sigma regulatory factor serine/threonine protein kinase {ECO:0000313|EMBL:CDE84093.1}; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
putative anti-sigma regulatory factor
PLM4_5_b1_sep16_scaffold_352_trna_3
unknown

Not on your lists

comp(8037..8120)
DNA (84bp)
transferRNA Leu
PLM4_5_b1_sep16_scaffold_352_trna_2
unknown

Not on your lists

comp(8144..8214)
DNA (71bp)
transferRNA Cys
PLM4_5_b1_sep16_scaffold_352_trna_1
unknown

Not on your lists

comp(8268..8340)
DNA (73bp)
transferRNA Gly
PLM4_5_b1_sep16_scaffold_352_10
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8364..8930)
DNA (567bp) protein (189aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase Tax=Nitrosomonas sp. AL212 RepID=F9ZH93_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_352_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8930..10696)
DNA (1767bp) protein (589aa)
UvrABC system protein C Tax=Sulfuricella denitrificans skB26 RepID=S6B392_9PROT
UvrABC system protein C
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_352_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10771..11337
DNA (567bp) protein (189aa)
Elongation factor P Tax=Nitrosospira sp. APG3 RepID=M5DH97_9PROT
translation elongation factor P
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_352_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11334..12365)
DNA (1032bp) protein (344aa)
nagZ; beta-hexosaminidase (EC:3.2.1.52)
Beta-hexosaminidase Tax=Aromatoleum aromaticum (strain EbN1) RepID=NAGZ_AROAE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_352_14
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12353..12736)
DNA (384bp) protein (128aa)
hypothetical protein Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AF00E7
holo-ACP synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_352_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12733..13479)
DNA (747bp) protein (249aa)
pyridoxine 5''''-phosphate synthase Tax=Azoarcus toluclasticus RepID=UPI00036D5EE1
pdxJ; pyridoxine 5'-phosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_352_16
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13476..14195)
DNA (720bp) protein (240aa)
DNA repair protein RecO Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRD5_SIDLE
DNA repair protein RecO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_352_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14192..15076)
DNA (885bp) protein (295aa)
GTPase Era Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMI7_AZOSU
GTP-binding protein Era
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_352_18
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15073..15744)
DNA (672bp) protein (224aa)
Ribonuclease 3 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMI6_AZOSU
ribonuclease III
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_352_19
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15764..16123)
DNA (360bp) protein (120aa)
Putative transmembrane protein Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AF69_NITEC
transmembrane protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_352_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16150..16938)
DNA (789bp) protein (263aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTN7_ACCPU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_352_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16941..18743)
DNA (1803bp) protein (601aa)
Elongation factor 4 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=LEPA_NITMU
GTP-binding protein LepA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_352_22

Not on your lists

comp(18792..18971)
DNA (180bp) protein (60aa)
Putative glutaredoxin 2 Tax=mine drainage metagenome RepID=E6QV72_9ZZZZ
Putative glutaredoxin 2 {ECO:0000313|EMBL:CBI11145.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM4_5_b1_sep16_scaffold_352_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19028..20455)
DNA (1428bp) protein (476aa)
protease Do (EC:3.4.21.107)
peptidase Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035DFEEC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_352_24
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20508..21467)
DNA (960bp) protein (320aa)
Putative sigma factor regulatory protein Tax=Azoarcus sp. (strain BH72) RepID=A1K5Z4_AZOSB
rseB; putative sigma factor regulatory protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_352_25
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21464..21991)
DNA (528bp) protein (176aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00037DED19
anti sigma-E protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_352_26
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21996..22595)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH9_AZOSU
RNA polymerase sigma factor RpoE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_352_27
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22686..23138)
DNA (453bp) protein (151aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Displaying items 1-30 of 71 in total

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