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PLM4_5_b1_sep16_scaffold_758

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_758_1
unknown

Not on your lists

1..129
DNA (129bp) protein (43aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_758_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(461..1354)
DNA (894bp) protein (298aa)
TauD/TfdA family dioxygenase (EC:1.14.11.17)
Putative TauD/TfdA family dioxygenase Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YV56_BRASO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_758_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1368..2264)
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YSB9_9RHIZ
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_758_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2289..3254)
DNA (966bp) protein (322aa)
proline iminopeptidase (EC:3.4.11.5)
Proline iminopeptidase Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AE77_NITEC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_758_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3410..5707
DNA (2298bp) protein (766aa)
malic enzyme Tax=Janthinobacterium sp. CG3 RepID=UPI0003451A07
malic enzyme
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_758_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5767..7158
DNA (1392bp) protein (464aa)
Fumarate hydratase class II Tax=Hylemonella gracilis ATCC 19624 RepID=F3KSH2_9BURK
fumarate hydratase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_758_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7179..7886
DNA (708bp) protein (236aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034B8610
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7880..8500
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0PWH5_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_758_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8590..9762
DNA (1173bp) protein (391aa)
Patatin Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CM79_SIDLE
patatin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10006..10527
DNA (522bp) protein (174aa)
GreA/GreB family elongation factor Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H282_METFK
GreA/GreB family elongation factor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_758_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10583..11506
DNA (924bp) protein (308aa)
Cobalamin biosynthesis protein CobD Tax=Nitrosospira sp. APG3 RepID=M5DVB9_9PROT
cobalamin biosynthesis protein cobD/CbiB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11596..12510)
DNA (915bp) protein (305aa)
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
hypothetical protein Tax=Leeia oryzae RepID=UPI00035DADDE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12650..12985)
DNA (336bp) protein (112aa)
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GH76_NITSI
pterin-4-alpha-carbinolamine dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13001..14251)
DNA (1251bp) protein (417aa)
Peptidase M48 Ste24p Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GH75_NITSI
peptidase M48 Ste24p
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14331..14876
DNA (546bp) protein (182aa)
Oligoribonuclease Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GH74_NITSI
Oligoribonuclease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_758_16
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14974..15471
DNA (498bp) protein (166aa)
Aspartyl protease Tax=Pseudomonas mosselii SJ10 RepID=V6UTQ6_9PSED
aspartyl protease
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM4_5_b1_sep16_scaffold_758_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15484..15690)
DNA (207bp) protein (69aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000303C7FD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15748..17178)
DNA (1431bp) protein (477aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase Tax=Chthonomonas calidirosea T49 RepID=S0ES67_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_758_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17507..18697)
DNA (1191bp) protein (397aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase Tax=Nitrosomonas sp. AL212 RepID=F9ZDF7_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_20
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18642..19532)
DNA (891bp) protein (297aa)
Hsp33 protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRH6_SIDLE
Hsp33 protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM4_5_b1_sep16_scaffold_758_21
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20028..20585)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNQ2_PUSST
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_758_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20582..20983)
DNA (402bp) protein (134aa)
Putative uncharacterized protein Tax=Delftia sp. (strain Cs1-4) RepID=F6AXV3_DELSC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_758_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21000..21410)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Desulfovibrio africanus PCS RepID=M5Q307_DESAF
putative 4-carboxymuconolactone decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_758_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21472..23136)
DNA (1665bp) protein (555aa)
Transmembrane protein Tax=Sulfuricella denitrificans skB26 RepID=S6AJ43_9PROT
transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_758_25
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23181..24059)
DNA (879bp) protein (293aa)
Putative uncharacterized protein Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DUR4_METI4
3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase family protein
3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase family protein {ECO:0000313|EMBL:AJP48091.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
PLM4_5_b1_sep16_scaffold_758_26
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24059..25504)
DNA (1446bp) protein (482aa)
Peptidase M48 Ste24p Tax=Sulfuricella denitrificans skB26 RepID=S6A9R6_9PROT
peptidase M48 Ste24p
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_758_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25742..27115
DNA (1374bp) protein (458aa)
ABC transporter nitrate-binding protein Tax=Oceanibaculum indicum P24 RepID=K2K5J5_9PROT
ABC-type nitrate transport system periplasmic component
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_758_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27120..27812
DNA (693bp) protein (231aa)
Putative nitrate transport system permease protein Tax=Methyloversatilis universalis FAM5 RepID=F5RBG8_9RHOO
Cyanate ABC transporter, permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 28 items

View Taxonomy