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PLM4_5_b1_sep16_scaffold_8348

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_8348_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1350
DNA (1350bp) protein (450aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Elongation factor 4 Tax=Nitrosospira sp. APG3 RepID=M5DIH0_9PROT
GTP-binding protein LepA
PLM4_5_b1_sep16_scaffold_8348_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1433..2239
DNA (807bp) protein (269aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I Tax=Nitrosospira sp. APG3 RepID=M5DIU1_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_8348_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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2251..2616
DNA (366bp) protein (122aa)
Putative transmembrane protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRD2_SIDLE
transmembrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_8348_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2646..3317
DNA (672bp) protein (224aa)
Ribonuclease 3 Tax=Methylovorus RepID=C6X6N2_METSD
rnc; ribonuclease III
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_8348_5
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3414..4154
DNA (741bp) protein (247aa)
GTPase Era Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P085_AROAE
era; GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM4_5_b1_sep16_scaffold_8348_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4192..4905
DNA (714bp) protein (238aa)
DNA repair protein RecO Tax=Sulfuricella denitrificans skB26 RepID=S6AC38_9PROT
DNA repair protein RecO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_8348_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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4902..5645
DNA (744bp) protein (248aa)
pdxJ; pyridoxine 5'-phosphate synthase PdxJ (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWP5_RUBGI
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_8348_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5642..6022
DNA (381bp) protein (127aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase Tax=Nitrosospira sp. APG3 RepID=M5DIV3_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_8348_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6019..7089
DNA (1071bp) protein (357aa)
Beta-hexosaminidase Tax=Sulfuricella denitrificans skB26 RepID=S6AGU1_9PROT
glycoside hydrolase family 3 domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_8348_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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7114..7752
DNA (639bp) protein (213aa)
SPO1 DNA polymerase {ECO:0000313|EMBL:GAO37544.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
uracil-DNA glycosylase
PLM4_5_b1_sep16_scaffold_8348_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7791..9302
DNA (1512bp) protein (504aa)
UvrABC system protein C Tax=Nitrosomonas eutropha (strain C91) RepID=UVRC_NITEC
uvrC; excinuclease ABC subunit C
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 11 items

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